RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 PIGOQ8TEQ8 1089 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 MRPS27Q92552 414 aaKnown RBP20.42■□□□□ 0.86
FXN-203ENST00000396366 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
FXN-203ENST00000396366 ZNF558Q96NG5 402 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 MTRQ99707 1265 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 TRAIPQ9BWF2 469 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 FAM105AQ9NUU6 356 aa20.42■□□□□ 0.86
FXN-203ENST00000396366 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
FXN-203ENST00000396366 LYPLA2O95372 231 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 HOXA11P31270 313 aaPredicted RBP20.41■□□□□ 0.86
FXN-203ENST00000396366 CSPP1Q1MSJ5 1256 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 PLPP4Q5VZY2 271 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 RNF149Q8NC42 400 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 FBXO18Q8NFZ0 1043 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 TCP11Q8WWU5 503 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 PPP2R3CQ969Q6 453 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 MSLNLQ96KJ4 702 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 AGPAT5Q9NUQ2 364 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 SPG21Q9NZD8 308 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 CD207Q9UJ71 328 aa20.41■□□□□ 0.86
FXN-203ENST00000396366 HIDE1A8MVS5 230 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 SPATA31C1P0DKV0 1188 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 COL9A1P20849 921 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 TECP42680 631 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 BCAR1P56945 870 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 ZP2Q05996 745 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 SMAD2Q15796 467 aaKnown RBP20.4■□□□□ 0.86
FXN-203ENST00000396366 UBXN11Q5T124 520 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 SRGAP1Q7Z6B7 1085 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 SLC39A11Q8N1S5 342 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 ASAP3Q8TDY4 903 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 TCF25Q9BQ70 676 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 ANKEF1Q9NU02 776 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 INPP5FQ9Y2H2 1132 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 PCDHB2Q9Y5E7 798 aa20.4■□□□□ 0.86
FXN-203ENST00000396366 ASAP2O43150 1006 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 ZNF623O75123 536 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 MED24O75448 989 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 OFD1O75665 1012 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 RBM25P49756 843 aaKnown RBP20.39■□□□□ 0.85
FXN-203ENST00000396366 RARRES1P49788 294 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 AFF1P51825 1210 aaKnown RBP20.39■□□□□ 0.85
FXN-203ENST00000396366 NBR1Q14596 966 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 DUSP6Q16828 381 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 CATSPER3Q86XQ3 398 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 C1QTNF1Q9BXJ1 281 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.85
FXN-203ENST00000396366 SH2B1Q9NRF2 756 aaPredicted RBP20.39■□□□□ 0.85
FXN-203ENST00000396366 TBC1D13Q9NVG8 400 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 PUF60Q9UHX1 559 aaKnown RBP20.39■□□□□ 0.85
FXN-203ENST00000396366 LZTS1Q9Y250 596 aa20.39■□□□□ 0.85
FXN-203ENST00000396366 FAM86C2PA6NEL3 165 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 B4GALT3O60512 393 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 SKIP12755 728 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 ARL2P36404 184 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 KRT17Q04695 432 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 SMAD4Q13485 552 aaKnown RBP20.38■□□□□ 0.85
FXN-203ENST00000396366 AGMOQ6ZNB7 445 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 MAEAQ7L5Y9 396 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 TMEM173Q86WV6 379 aaPredicted RBP20.38■□□□□ 0.85
FXN-203ENST00000396366 FAM184AQ8NB25 1140 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 MRPL9Q9BYD2 267 aaKnown RBP20.38■□□□□ 0.85
FXN-203ENST00000396366 NRDE2Q9H7Z3 1164 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 C11orf16Q9NQ32 467 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 ENTPD7Q9NQZ7 604 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 FAM50BQ9Y247 325 aa20.38■□□□□ 0.85
FXN-203ENST00000396366 C19orf67A6NJJ6 358 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 PI4K2BG5E9Z4 385 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 GAS2O43903 313 aaKnown RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 ZC3H11AO75152 810 aaKnown RBP eCLIP20.37■□□□□ 0.85
FXN-203ENST00000396366 DGAT1O75907 488 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 PPM1AP35813 382 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 ALDH7A1P49419 539 aaKnown RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 RAB27AP51159 221 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 PTENP60484 403 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 HMGN5P82970 282 aaKnown RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 CAPSQ13938 189 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 NOMO2Q5JPE7 1267 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 TTC38Q5R3I4 469 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 PDE12Q6L8Q7 609 aaKnown RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 GLB1LQ6UWU2 654 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 TMC7Q7Z402 723 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 ZNF280BQ86YH2 543 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 NOSTRINQ8IVI9 506 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 ADHFE1Q8IWW8 467 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 BCL7CQ8WUZ0 217 aaPredicted RBP20.37■□□□□ 0.85
FXN-203ENST00000396366 CPB2Q96IY4 423 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 GBP3Q9H0R5 595 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 GPRC5CQ9NQ84 441 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 DNAJB4Q9UDY4 337 aa20.37■□□□□ 0.85
FXN-203ENST00000396366 TSPAN1O60635 241 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 EYA4O95677 639 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 OR52Z1P0C646 297 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 GLRA2P23416 452 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 COASYQ13057 564 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
FXN-203ENST00000396366 MXD4Q14582 209 aaPredicted RBP20.36■□□□□ 0.85
FXN-203ENST00000396366 LLGL2Q6P1M3 1020 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms