RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HSP90B2PQ58FF3 399 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 XKR9Q5GH70 373 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 SYCE1Q8N0S2 351 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 PCIF1Q9H4Z3 704 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 EXOC7Q9UPT5 735 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 CD2APQ9Y5K6 639 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 TMEM150BA6NC51 233 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 TISP43B9A030 160 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 GALCP54803 685 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 PEX3P56589 373 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 DLG4P78352 724 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 PPP3CAQ08209 521 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
NUP50-202ENST00000396096 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 ACTRT1Q8TDG2 376 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 NSUN6Q8TEA1 469 aaKnown RBP18.23■□□□□ 0.51
NUP50-202ENST00000396096 C17orf75Q9HAS0 396 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
NUP50-202ENST00000396096 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 NFASCO94856 1347 aa18.23■□□□□ 0.51
NUP50-202ENST00000396096 SLC16A4O15374 487 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 DKC1O60832 514 aaKnown RBP eCLIP18.22■□□□□ 0.51
NUP50-202ENST00000396096 STBD1O95210 358 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 KCNA2P16389 499 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 EPHB4P54760 987 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 NOL9Q5SY16 702 aaKnown RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 EMBQ6PCB8 327 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 ANO5Q75V66 913 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 GSPT2Q8IYD1 628 aaKnown RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 TMEM161BQ8NDZ6 487 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 SPIRE2Q8WWL2 714 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 NTPCRQ9BSD7 190 aaKnown RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 GPRC5CQ9NQ84 441 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 GDF3Q9NR23 364 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 A0A0U1RQG5 324 aaPredicted RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 STAM2O75886 525 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 CLSTN1O94985 981 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 SYF2O95926 243 aaKnown RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 SMTNP53814 917 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 HMGCS2P54868 508 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 FAM102BQ5T8I3 360 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 ANGEL2Q5VTE6 544 aaKnown RBP18.22■□□□□ 0.51
NUP50-202ENST00000396096 PLA2G4FQ68DD2 849 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 OTUD6AQ7L8S5 288 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 MAP4K3Q8IVH8 894 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 GLYCTKQ8IVS8 523 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 RFFLQ8WZ73 363 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 CAVIN3Q969G5 261 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 TBX20Q9UMR3 447 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 PPP2R3BQ9Y5P8 575 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 MYPNQ86TC9 1320 aa18.22■□□□□ 0.51
NUP50-202ENST00000396096 KCNK3O14649 394 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 SLC7A5Q01650 507 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 NNTQ13423 1086 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 DNAAF5Q86Y56 855 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 IFT20Q8IY31 132 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 ATP6V0A1Q93050 837 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 CDHR1Q96JP9 859 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 CALR3Q96L12 384 aaKnown RBP18.21■□□□□ 0.51
NUP50-202ENST00000396096 SH2D3AQ9BRG2 576 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 VPS18Q9P253 973 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 FAN1Q9Y2M0 1017 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 ZNF541Q9H0D2 1346 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 LCTP09848 1927 aa18.21■□□□□ 0.51
NUP50-202ENST00000396096 FOXN3O00409 490 aaPredicted RBP18.2■□□□□ 0.5
NUP50-202ENST00000396096 RGS20O76081 388 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 TNFAIP3P21580 790 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 NPTX2P47972 431 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 RTP1P59025 263 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 TNNC1P63316 161 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 DMP1Q13316 513 aaPredicted RBP18.2■□□□□ 0.5
NUP50-202ENST00000396096 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 NT5DC3Q86UY8 548 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 RASGEF1CQ8N431 466 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 SCFD2Q8WU76 684 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 TEX13BQ9BXU2 312 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 SSC5DA1L4H1 1573 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ZNF862O60290 1169 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 GCLMP48507 274 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 PPATQ06203 517 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ENPEPQ07075 957 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 TCEAL1Q15170 157 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ARHGAP44Q17R89 818 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 PEX26Q7Z412 305 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ARHGEF19Q8IW93 802 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 HES6Q96HZ4 224 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ACAD9Q9H845 621 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms