RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
BDNF-204ENST00000395980 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 SEL1L2Q5TEA6 688 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 TTBK2Q6IQ55 1244 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
BDNF-204ENST00000395980 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 IFT74Q96LB3 600 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 SEL1LQ9UBV2 794 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 ALG6Q9Y672 507 aa9.38□□□□□ -0.91
BDNF-204ENST00000395980 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 ABCB4P21439 1286 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 CCND1P24385 295 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 PPARDQ03181 441 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 TBC1D16Q8TBP0 767 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 ANKRD27Q96NW4 1050 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 SERPINB12Q96P63 405 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 INTS2Q9H0H0 1204 aaKnown RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 WNT8AQ9H1J5 351 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 RARAP10276 462 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 CIITAP33076 1130 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 QRICH1Q2TAL8 776 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 SLCO2A1Q92959 643 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 THAP2Q9H0W7 228 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 DMAC2Q9NW81 257 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 COG5Q9UP83 839 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 UBOX5O94941 541 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 GJB6O95452 261 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 CLTAP09496 248 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 BNIP1Q12981 228 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 CTTNQ14247 550 aaKnown RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 MYBPC2Q14324 1141 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 LENG9Q96B70 501 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 STAMBPL1Q96FJ0 436 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 AGPAT1Q99943 283 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 ABCF3Q9NUQ8 709 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
BDNF-204ENST00000395980 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
BDNF-204ENST00000395980 CLIC2O15247 247 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 SREBF1P36956 1147 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 NFIXQ14938 502 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 EPS8L3Q8TE67 593 aaKnown RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 NSMCE1Q8WV22 266 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 RUSC1Q9BVN2 902 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 SUGT1Q9Y2Z0 365 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 DAGLAQ9Y4D2 1042 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 RSPH10B2B2RC85 870 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 MEIS2O14770 477 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 WFS1O76024 890 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 FAM13AO94988 1023 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 RSPH10BP0C881 870 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 COPB2P35606 906 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 COILP38432 576 aaPredicted RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 PEX5P50542 639 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 MYL7Q01449 175 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 MYO1EQ12965 1108 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 ACCSLQ4AC99 568 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 BHMT2Q9H2M3 363 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 WHRNQ9P202 907 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 VAV3Q9UKW4 847 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 STRCQ7RTU9 1775 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 MEIS1O00470 390 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 LIN7AO14910 233 aaPredicted RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 BCRP11274 1271 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 HSPA2P54652 639 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 EIF6P56537 245 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms