RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 PRICKLE1Q96MT3 831 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 CLSTN2Q9H4D0 955 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MARK1Q9P0L2 795 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 BAG5Q9UL15 447 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CLEC4AQ9UMR7 237 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 C16orf96A6NNT2 1141 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CETN3O15182 167 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TXNL1O43396 289 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 THAP12O43422 761 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 GLRX3O76003 335 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 POLR2MP0CAP2 368 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 IL11P20809 199 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 JAK1P23458 1154 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MCM5P33992 734 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PPM1AP35813 382 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 VPS41P49754 854 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ALDH3A2P51648 485 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 GSTO1P78417 241 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MAP3K10Q02779 954 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 DDR1Q08345 913 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 KIF5AQ12840 1032 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 BMPR2Q13873 1038 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 POTEEQ6S8J3 1075 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 B3GNT6Q6ZMB0 384 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZFPM1Q8IX07 1006 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TTLL11Q8NHH1 800 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HERVK_113Q902F9 699 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 EXOC4Q96A65 974 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ABHD17AQ96GS6 310 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 UBP1Q9NZI7 540 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HSPBP1Q9NZL4 362 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TUBGCP4Q9UGJ1 667 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZNF510Q9Y2H8 683 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZBED9Q6R2W3 1325 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ERICH3Q5RHP9 1530 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ARHGAP10A1A4S6 786 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TRIM43BA6NCK2 446 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TSC22D2O75157 780 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 C6P13671 934 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 L1CAMP32004 1257 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 GPC3P51654 580 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 IFI35P80217 286 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 ADAM15Q13444 863 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 C6orf132Q5T0Z8 1188 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 OR7E24Q6IFN5 339 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 NLRC3Q7RTR2 1065 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 FAM156AQ8NDB6 213 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 BCL7CQ8WUZ0 217 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 PIBF1Q8WXW3 757 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 SLC39A7Q92504 469 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 PTP4A1Q93096 173 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TRIM43Q96BQ3 446 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 PPP1R14BQ96C90 147 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 DCTPP1Q9H773 170 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 GORASP2Q9H8Y8 452 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ZWILCHQ9H900 591 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 PRDM5Q9NQX1 630 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 POLA1P09884 1462 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 DCAF8L1A6NGE4 600 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 E2F3O00716 465 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ABLIM1O14639 778 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RTN3O95197 1032 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 SNRNP70P08621 437 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 PRKAR1BP31321 381 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RPL9P32969 192 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 GJA5P36382 358 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 PPP5CP53041 499 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 HTRA3P83110 453 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 SSRP1Q08945 709 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 KRT32Q14532 448 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ZNF772Q68DY9 489 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 THOC7Q6I9Y2 204 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 C15orf52Q6ZUT6 534 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 BNIPLQ7Z465 357 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 LUZP1Q86V48 1076 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 OR8H3Q8N146 312 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 OR2C3Q8N628 320 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 EFHBQ8N7U6 833 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TSEN2Q8NCE0 465 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 RFWD2Q8NHY2 731 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 PLD4Q96BZ4 506 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TM9SF3Q9HD45 589 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ZNF277Q9NRM2 450 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 INTS10Q9NVR2 710 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 DPP7Q9UHL4 492 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 DENND2AQ9ULE3 1009 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 USP20Q9Y2K6 914 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 SNAPC4Q5SXM2 1469 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RIMBP3CA6NJZ7 1639 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RIMBP3BA6NNM3 1639 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RIMBP3Q9UFD9 1639 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 NEMP1O14524 444 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 IKBKBO14920 756 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 SNRPA1P09661 255 aaKnown RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 ACSL1P33121 698 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 KPNA1P52294 538 aaPredicted RBP4.61□□□□□ -1.67
HERC4-204ENST00000395198 TRIM32Q13049 653 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 CTC1Q2NKJ3 1217 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 RNF219Q5W0B1 726 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms