RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 PGBD4Q96DM1 585 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 ESYT1Q9BSJ8 1104 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 NRDE2Q9H7Z3 1164 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 WNT16Q9UBV4 365 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 FGFR4P22455 802 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 KLRC2P26717 231 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 SIX5Q8N196 739 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 CMASQ8NFW8 434 aaPredicted RBP22.19■■□□□ 1.14
UPK3B-203ENST00000394849 RDM1Q8NG50 284 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 STAMQ92783 540 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 ZNF668Q96K58 619 aaPredicted RBP22.19■■□□□ 1.14
UPK3B-203ENST00000394849 NIFKQ9BYG3 293 aaKnown RBP22.19■■□□□ 1.14
UPK3B-203ENST00000394849 RHOBTB2Q9BYZ6 727 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 ANO2Q9NQ90 1003 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 SSX2IPQ9Y2D8 614 aa22.19■■□□□ 1.14
UPK3B-203ENST00000394849 PI15O43692 258 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 CLCN4P51793 760 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 TARBP2Q15633 366 aaKnown RBP22.18■■□□□ 1.14
UPK3B-203ENST00000394849 URGCPQ8TCY9 931 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 NXPE3Q969Y0 559 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 MRPL17Q9NRX2 175 aaKnown RBP22.18■■□□□ 1.14
UPK3B-203ENST00000394849 FAM217BQ9NTX9 383 aaPredicted RBP22.18■■□□□ 1.14
UPK3B-203ENST00000394849 FAM105AQ9NUU6 356 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 KANSL3Q9P2N6 904 aa22.18■■□□□ 1.14
UPK3B-203ENST00000394849 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 GAS7O60861 476 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 OFD1O75665 1012 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 LMNAP02545 664 aaKnown RBP22.17■■□□□ 1.14
UPK3B-203ENST00000394849 USP11P51784 963 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 LENG9Q96B70 501 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 KLHL5Q96PQ7 755 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 JPH2Q9BR39 696 aaPredicted RBP22.17■■□□□ 1.14
UPK3B-203ENST00000394849 PIN4Q9Y237 131 aaKnown RBP22.17■■□□□ 1.14
UPK3B-203ENST00000394849 DMXL1Q9Y485 3027 aa22.17■■□□□ 1.14
UPK3B-203ENST00000394849 C2orf16Q68DN1 1984 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 IGKV6-21A0A0C4DH24 114 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 CSDE1O75534 798 aaKnown RBP22.16■■□□□ 1.14
UPK3B-203ENST00000394849 ALDH2P05091 517 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 HMGB1P09429 215 aaKnown RBP22.16■■□□□ 1.14
UPK3B-203ENST00000394849 RFX1P22670 979 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 CDC27P30260 824 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 KRT32Q14532 448 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 XKR3Q5GH77 459 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 BMP2KLQ5H9B9 411 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 KCNG4Q8TDN1 519 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 LPPQ93052 612 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 TMEM175Q9BSA9 504 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 TEKT3Q9BXF9 490 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 INPP5FQ9Y2H2 1132 aa22.16■■□□□ 1.14
UPK3B-203ENST00000394849 A0A087WZ62 844 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 STK25O00506 426 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 CNPP09543 421 aaKnown RBP22.15■■□□□ 1.14
UPK3B-203ENST00000394849 SLC11A1P49279 550 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 TSGA10IPQ3SY00 556 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 LRCH2Q5VUJ6 765 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 ZC3H14Q6PJT7 736 aaKnown RBP22.15■■□□□ 1.14
UPK3B-203ENST00000394849 BCL7CQ8WUZ0 217 aaPredicted RBP22.15■■□□□ 1.14
UPK3B-203ENST00000394849 SLC5A5Q92911 643 aa22.15■■□□□ 1.14
UPK3B-203ENST00000394849 FAM193BQ96PV7 902 aaPredicted RBP22.15■■□□□ 1.14
UPK3B-203ENST00000394849 FDXACB1Q9BRP7 624 aaPredicted RBP22.15■■□□□ 1.14
UPK3B-203ENST00000394849 CNTNAP2Q9UHC6 1331 aa22.14■■□□□ 1.14
UPK3B-203ENST00000394849 MSH4O15457 936 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 LILRB3O75022 631 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 ADH1AP07327 375 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 UGCGQ16739 394 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 CATSPER4Q7RTX7 472 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 CCDC148Q8NFR7 591 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 VN1R3Q9BXE9 311 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 GBP3Q9H0R5 595 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 WDR6Q9NNW5 1121 aaKnown RBP22.14■■□□□ 1.13
UPK3B-203ENST00000394849 SUCLA2Q9P2R7 463 aaPredicted RBP22.14■■□□□ 1.13
UPK3B-203ENST00000394849 DNAJB4Q9UDY4 337 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 SEPT9Q9UHD8 586 aaPredicted RBP22.14■■□□□ 1.13
UPK3B-203ENST00000394849 FAN1Q9Y2M0 1017 aa22.14■■□□□ 1.13
UPK3B-203ENST00000394849 FRYLO94915 3013 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 PRPF3O43395 683 aaKnown RBP22.13■■□□□ 1.13
UPK3B-203ENST00000394849 CHMP2AO43633 222 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 C1RP00736 705 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 ADD1P35611 737 aaKnown RBP22.13■■□□□ 1.13
UPK3B-203ENST00000394849 FGD1P98174 961 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 AKAP17AQ02040 695 aaKnown RBP22.13■■□□□ 1.13
UPK3B-203ENST00000394849 DRP2Q13474 957 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 MTERF2Q49AM1 385 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 EPS15L1Q9UBC2 864 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 PCDHB2Q9Y5E7 798 aa22.13■■□□□ 1.13
UPK3B-203ENST00000394849 MAFO75444 373 aaPredicted RBP22.12■■□□□ 1.13
UPK3B-203ENST00000394849 URODP06132 367 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 SRFP11831 508 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 MIER3Q7Z3K6 550 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 MRPL10Q7Z7H8 261 aaKnown RBP22.12■■□□□ 1.13
UPK3B-203ENST00000394849 ZNF280BQ86YH2 543 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 RHPN2Q8IUC4 686 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 EXOC8Q8IYI6 725 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 HDAC7Q8WUI4 952 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 CEP89Q96ST8 783 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 UNC45AQ9H3U1 944 aa22.12■■□□□ 1.13
UPK3B-203ENST00000394849 UBN1Q9NPG3 1134 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms