RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
RTN4-206ENST00000394611 LRRC8CQ8TDW0 803 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 FAM84AQ96KN4 292 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 SERPINB4P48594 390 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 RASSF2P50749 326 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 BIRC3Q13489 604 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
RTN4-206ENST00000394611 ACSF2Q96CM8 615 aaPredicted RBP9.49□□□□□ -0.89
RTN4-206ENST00000394611 NR2E1Q9Y466 385 aa9.49□□□□□ -0.89
RTN4-206ENST00000394611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 PLA2G4BP0C869 781 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 ETS2P15036 469 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 CASP4P49662 377 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 PDE6CP51160 858 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 ITGB3BPQ13352 177 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 MTMR2Q13614 643 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 SLC18A3Q16572 532 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 SLC30A9Q6PML9 568 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 TMEM47Q9BQJ4 181 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 CUEDC2Q9H467 287 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 NPHS2Q9NP85 383 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 DCP1AQ9NPI6 582 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 DNM3Q9UQ16 869 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 ZNF148Q9UQR1 794 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 CNTNAP5Q8WYK1 1306 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 SLC37A4O43826 429 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 CBX6O95503 412 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 AFPP02771 609 aaKnown RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 PBX1P40424 430 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 DEUP1Q05D60 604 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 TMED8Q6PL24 325 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 KCNK18Q7Z418 384 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 MROH5Q6ZUA9 1318 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 RSPH10B2B2RC85 870 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 PI4K2BG5E9Z4 385 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 RSPH10BP0C881 870 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 GCLMP48507 274 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 EPHB1P54762 984 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 PREPLQ4J6C6 727 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 ZC2HC1CQ53FD0 456 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 SLC25A41Q8N5S1 370 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 NT5C3AQ9H0P0 336 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
RTN4-206ENST00000394611 VCXQ9H320 206 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 CYP4F11Q9HBI6 524 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 LRRC4CQ9HCJ2 640 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 KIF13BQ9NQT8 1826 aa9.48□□□□□ -0.89
RTN4-206ENST00000394611 EXOC1LA0A1B0GW35 172 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 E2F8A0AVK6 867 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 CLDN3O15551 220 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RPS6KA5O75582 802 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RHOBTB3O94955 611 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 FSBPO95073 299 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 CUL1Q13616 776 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 GSDMBQ8TAX9 411 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 SLC35G2Q8TBE7 412 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 AGR3Q8TD06 166 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 PSTPIP2Q9H939 334 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RGL1Q9NZL6 768 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 DNAJC12Q9UKB3 198 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 GH1P01241 217 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RFC5P40937 340 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 SPATA21Q7Z572 469 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 SYCE1Q8N0S2 351 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 TEKT4Q8WW24 435 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 CEP72Q9P209 647 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 PPP1R12AO14974 1030 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 DNAJC6O75061 913 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 KRT16P08779 473 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 RPL13P26373 211 aaKnown RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 NMT1P30419 496 aaKnown RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 SERPINB6P35237 376 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 CETN2P41208 172 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 TGFB2P61812 414 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 IGBP1P78318 339 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms