RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 PRR16Q569H4 304 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 CAPRIN2Q6IMN6 1127 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 ZDHHC14Q8IZN3 488 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 CTNNAL1Q9UBT7 734 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 CNOT7Q9UIV1 285 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 DIS3Q9Y2L1 958 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 CCND1P24385 295 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 MSH2P43246 934 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 MESDQ14696 234 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 FITM2Q8N6M3 262 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 TYW1Q9NV66 732 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 USP40Q9NVE5 1235 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 GH1P01241 217 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 TRIM49P0CI25 452 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 TRIM49CP0CI26 452 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 TRIM68Q6AZZ1 485 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 FAM186BQ8IYM0 893 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 BHMT2Q9H2M3 363 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 CCDC134Q9H6E4 229 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 ARHGEF10LQ9HCE6 1279 aa17.69■□□□□ 0.42
EFEMP1-202ENST00000394555 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 NCANO14594 1321 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 AKR1B1P15121 316 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 CHRNA3P32297 505 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 BNIP1Q12981 228 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 ARMC2Q8NEN0 867 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 CLK2P49760 499 aaKnown RBP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 LACTBP83111 547 aaPredicted RBP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 ATP11AP98196 1134 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 SEPT14Q6ZU15 432 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 SPATA21Q7Z572 469 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 UBL4BQ8N7F7 174 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 RUSC1Q9BVN2 902 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 TBK1Q9UHD2 729 aa17.68■□□□□ 0.42
EFEMP1-202ENST00000394555 COG2Q14746 738 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ZC2HC1CQ53FD0 456 aaPredicted RBP17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 SLC17A8Q8NDX2 589 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 IFT74Q96LB3 600 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 RMDN2Q96LZ7 410 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 STK33Q9BYT3 514 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 YIPF3Q9GZM5 350 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 SLC5A4Q9NY91 659 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 PODXLO00592 558 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 RARGP13631 454 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 CYP2J2P51589 502 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ZNF131P52739 623 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 SLMAPQ14BN4 828 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 SLC20A1Q8WUM9 679 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 TAOK3Q9H2K8 898 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 ADAM22Q9P0K1 906 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 PARP2Q9UGN5 583 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 PFASO15067 1338 aa17.67■□□□□ 0.42
EFEMP1-202ENST00000394555 EME2A4GXA9 379 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 ALADP13716 330 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 NMT1P30419 496 aaKnown RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CTTNQ14247 550 aaKnown RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 TNIP1Q15025 636 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 GALNTL6Q49A17 601 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CBWD6Q4V339 395 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CBWD3Q5JTY5 395 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CBWD5Q5RIA9 395 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 EPM2AIP1Q7L775 607 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CPNE8Q86YQ8 564 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 ARL2BPQ9Y2Y0 163 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SYNGAP1Q96PV0 1343 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 ATMINO43313 823 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 OAS1P00973 400 aaKnown RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 IRX1P78414 480 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CROCCP2Q86T23 111 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CDC42EP4Q9H3Q1 356 aaKnown RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 ANKRD62A6NC57 917 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 FTLP02792 175 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 POLD1P28340 1107 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 FMO5P49326 533 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 ZNF543Q08ER8 600 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 CALCOCO2Q13137 446 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SNX1Q13596 522 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 NFIXQ14938 502 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 TAF11Q15544 211 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 BTNL9Q6UXG8 535 aa17.66■□□□□ 0.42
EFEMP1-202ENST00000394555 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms