RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 DDX47Q9H0S4 455 aaKnown RBP10.77□□□□□ -0.68
PSEN1-204ENST00000394164 GOPCQ9HD26 462 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 RABGAP1Q9Y3P9 1069 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 SLX4Q8IY92 1834 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 A0A1W2PQJ5 194 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 KCNK3O14649 394 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 SORBS3O60504 671 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 SMIM24O75264 130 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 SHBGP04278 402 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 KLRC1P26715 233 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 TNFRSF8P28908 595 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 SLC17A8Q8NDX2 589 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 MKL1Q969V6 931 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 CHMP6Q96FZ7 201 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 OSBPL1AQ9BXW6 950 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 PIDD1Q9HB75 910 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 TMOD2Q9NZR1 351 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-204ENST00000394164 ABCB11O95342 1321 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 BRWD3Q6RI45 1802 aa10.77□□□□□ -0.69
PSEN1-204ENST00000394164 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 DAPK3O43293 454 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 PYGLP06737 847 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 GNAT1P11488 350 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 PECAM1P16284 738 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 HSPA9P38646 679 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ABL2P42684 1182 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 RAB27AP51159 221 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ITIH3Q06033 890 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 DLGAP5Q15398 846 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ZNF572Q7Z3I7 529 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TAX1BP1Q86VP1 789 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TRIM59Q8IWR1 403 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 BATF3Q9NR55 127 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 AJAP1Q9UKB5 411 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 A0A1B0GVG6 124 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 H0YGN5 161 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 IGF2BP3O00425 579 aaKnown RBP eCLIP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 CEP104O60308 925 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 UBOX5O94941 541 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 MMEP08473 750 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ARP10275 920 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 CHN1P15882 459 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 RPS6KA3P51812 740 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ANKS4BQ8N8V4 417 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 MGARPQ8TDB4 240 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ELMO3Q96BJ8 720 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 XPO6Q96QU8 1125 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 SEPT11Q9NVA2 429 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 FZD1Q9UP38 647 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ATP8A1Q9Y2Q0 1164 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 NFS1Q9Y697 457 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TISP43B9A030 160 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 FAM13AO94988 1023 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TRIM49P0CI25 452 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TRIM49CP0CI26 452 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 PRLRP16471 622 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 RPA1P27694 616 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 PTK2Q05397 1052 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 TAF11Q15544 211 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 KNOP1Q1ED39 458 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 FIGNQ5HY92 759 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 ADAT2Q7Z6V5 191 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 RUBCNQ92622 972 aa10.76□□□□□ -0.69
PSEN1-204ENST00000394164 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 CELF4Q9BZC1 486 aaKnown RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 WRAP73Q9P2S5 460 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-204ENST00000394164 SPDYE5A6NIY4 337 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 GAS7O60861 476 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 NR3C1P04150 777 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 XRCC5P13010 732 aaKnown RBP10.75□□□□□ -0.69
PSEN1-204ENST00000394164 SSR1P43307 286 aaKnown RBP10.75□□□□□ -0.69
PSEN1-204ENST00000394164 DHX9Q08211 1270 aaKnown RBP10.75□□□□□ -0.69
PSEN1-204ENST00000394164 ASIC2Q16515 512 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 MREGQ8N565 214 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 PSMD1Q99460 953 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 PRMT1Q99873 361 aaKnown RBP10.75□□□□□ -0.69
PSEN1-204ENST00000394164 PCIF1Q9H4Z3 704 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 ECT2Q9H8V3 914 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 MLXIPLQ9NP71 852 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 CEP72Q9P209 647 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 KRT16P08779 473 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 SREBF1P36956 1147 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 SLCO1A2P46721 670 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 TUBP50607 506 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 TNNC1P63316 161 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 AP3B2Q13367 1082 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 EMC10Q5UCC4 262 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 SLC30A9Q6PML9 568 aa10.75□□□□□ -0.69
PSEN1-204ENST00000394164 SYT2Q8N9I0 419 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-204ENST00000394164 BORCS6Q96GS4 357 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms