RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 LRCH2Q5VUJ6 765 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 MCTP2Q6DN12 878 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 PDE12Q6L8Q7 609 aaKnown RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 PPP4R4Q6NUP7 873 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 RNF207Q6ZRF8 634 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 SPATC1Q76KD6 591 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 VASH1Q7L8A9 365 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 TRMT1LQ7Z2T5 733 aaKnown RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 RNF180Q86T96 592 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 RAD54LQ92698 747 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 WDR11Q9BZH6 1224 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 RAB6BQ9NRW1 208 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 HRH3Q9Y5N1 445 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 PHACTR2O75167 634 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 IL2RAP01589 272 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 CYP3A4P08684 503 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ITGB5P18084 799 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 UBASH3AP57075 661 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 STK4Q13043 487 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 TPD52L1Q16890 204 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZNF658Q5TYW1 1059 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZNF784Q8NCA9 323 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 NELFBQ8WX92 580 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 C12orf42Q96LP6 360 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZNF577Q9BSK1 485 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZHX3Q9H4I2 956 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 SLC39A2Q9NP94 309 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 EXOC1Q9NV70 894 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 RMND1Q9NWS8 449 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 TBC1D7Q9P0N9 293 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 VAV3Q9UKW4 847 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 PPM1HQ9ULR3 514 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZKSCAN5Q9Y2L8 839 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 DOCK5Q9H7D0 1870 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 RBBP6Q7Z6E9 1792 aaKnown RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 KIAA1217Q5T5P2 1943 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 GRIN3BO60391 1043 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 GAS7O60861 476 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 MICAL2O94851 1124 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 RASGRP1O95267 797 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 PF4P02776 101 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 SOX5P35711 763 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 RAB27AP51159 221 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 PMS1P54277 932 aaKnown RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 PAK1Q13153 545 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 PABPC4Q13310 644 aaKnown RBP eCLIP6.49□□□□□ -1.371e-6■■□□□ 14
CASC3-202ENST00000394114 CTTNQ14247 550 aaKnown RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 TLR1Q15399 786 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 C21orf62-AS1Q17RA5 79 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 TMEM119Q4V9L6 283 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ARMCX6Q7L4S7 300 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ZNF438Q7Z4V0 828 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 REPS2Q8NFH8 660 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 TTC8Q8TAM2 541 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ENOX1Q8TC92 643 aaKnown RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 RMDN3Q96TC7 470 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 PAGR1Q9BTK6 254 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 ASPSCR1Q9BZE9 553 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 CUEDC2Q9H467 287 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 EHMT1Q9H9B1 1298 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 STK17AQ9UEE5 414 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 FBXO9Q9UK97 447 aaPredicted RBP6.49□□□□□ -1.37
CASC3-202ENST00000394114 TLR6Q9Y2C9 796 aa6.49□□□□□ -1.37
CASC3-202ENST00000394114 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 IPO5O00410 1097 aaKnown RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 LILRA1O75019 489 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 KIF4AO95239 1232 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 GJB6O95452 261 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PLA2G4BP0C869 781 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 SPATA31C1P0DKV0 1188 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 GPBP1Q86WP2 473 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 TPH2Q8IWU9 490 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 OR6P1Q8NGX9 317 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PIGOQ8TEQ8 1089 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ZNF669Q96BR6 464 aaPredicted RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 C7orf25Q9BPX7 421 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 EIF2AK1Q9BQI3 630 aaKnown RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 TEX13BQ9BXU2 312 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 TNKS2Q9H2K2 1166 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 NMRK2Q9NPI5 230 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 CASS4Q9NQ75 786 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 KCNH7Q9NS40 1196 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ZMYM5Q9UJ78 669 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 SCN4AP35499 1836 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PAPPA2Q9BXP8 1791 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 IQCA1LA6NCM1 817 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms