RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LRRC71Q8N4P6 559 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 TCP11Q8WWU5 503 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 PRPF31Q8WWY3 499 aaKnown RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 C16orf45Q96MC5 204 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 TTYH3Q9C0H2 523 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 RNPEPQ9H4A4 650 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 FLRT1Q9NZU1 646 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 ARHGAP28Q9P2N2 729 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 A0A1W2PQJ5 194 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 GOLGA8IPA6NC78 632 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 GOLGA8JA6NMD2 632 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 K7ERI5 159 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 HNRNPDLO14979 420 aaKnown RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 EPHB6O15197 1021 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 DYNC1LI2O43237 492 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 CCP110O43303 1012 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 ZSCAN12O43309 604 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 AOC2O75106 756 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 HOXC6P09630 235 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 SRGAP2CP0DJJ0 459 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 KCNJ6P48051 423 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 LIG4P49917 911 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 CHMP4BP1P59074 171 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 DRP2Q13474 957 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 MTF1Q14872 753 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 SOCS4Q8WXH5 440 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 POMGNT1Q8WZA1 660 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 SLC35C1Q96A29 364 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 JPH2Q9BR39 696 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 SUCLA2Q9P2R7 463 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 ZNF215Q9UL58 517 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 MMP3P08254 477 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 INSRRP14616 1297 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 MATR3P43243 847 aaKnown RBP eCLIP9.43□□□□□ -0.9
TDP1-203ENST00000393454 CAPSQ13938 189 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 DGKDQ16760 1214 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 EXOC3L4Q17RC7 722 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 DEFB115Q30KQ5 88 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 ZNF484Q5JVG2 852 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 EFCAB12Q6NXP0 572 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 GBP6Q6ZN66 633 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 RHPN2Q8IUC4 686 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 C12orf56Q8IXR9 622 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 ZSWIM2Q8NEG5 633 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 PSPC1Q8WXF1 523 aaKnown RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 USP6NLQ92738 828 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 SAAL1Q96ER3 474 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 PPP1R13BQ96KQ4 1090 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 DNAJC7Q99615 494 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 APBA2Q99767 749 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 DESI2Q9BSY9 194 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 NLRC4Q9NPP4 1024 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 GJD2Q9UKL4 321 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 USP20Q9Y2K6 914 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 H3BRB1 525 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 ADCY6O43306 1168 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 OFD1O75665 1012 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 SLC9A1P19634 815 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 ADSSP30520 456 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 PSMC4P43686 418 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 FCGRTP55899 365 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 POLR2FP61218 127 aaKnown RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 APBA1Q02410 837 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 LAMTOR4Q0VGL1 99 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 BFSP1Q12934 665 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 NOGQ13253 232 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 MXD4Q14582 209 aaPredicted RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 OLFML2BQ68BL8 750 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 RAD9BQ6WBX8 426 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 ZBTB10Q96DT7 871 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 CAPNS2Q96L46 248 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 CHP1Q99653 195 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 TUT1Q9H6E5 874 aaKnown RBP9.43□□□□□ -0.9
TDP1-203ENST00000393454 PPP2R2CQ9Y2T4 447 aa9.43□□□□□ -0.9
TDP1-203ENST00000393454 EVPLQ92817 2033 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 LRRC53A6NM62 1247 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 ADCY3O60266 1144 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 ZNF865P0CJ78 1059 aaPredicted RBP9.42□□□□□ -0.9
TDP1-203ENST00000393454 ACTN1P12814 892 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 TNNT1P13805 278 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 SCP2P22307 547 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 CTGFP29279 349 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 FMO5P49326 533 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms