RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MYCP01106 439 aaPredicted RBP14.63□□□□□ -0.07
USP44-202ENST00000393091 ADRB2P07550 413 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 IGBP1P78318 339 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 FAM47CQ5HY64 1035 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 PANK2Q9BZ23 570 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 GPRC5CQ9NQ84 441 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 ACKR2O00590 384 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 NFKBIBQ15653 356 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 RASIP1Q5U651 963 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 FTHL17Q9BXU8 183 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 FNDC1Q4ZHG4 1894 aaPredicted RBP14.63□□□□□ -0.07
USP44-202ENST00000393091 A0A087WWV3 80 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 M0QZ92 97 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 KIAA0391O15091 583 aaKnown RBP14.63□□□□□ -0.07
USP44-202ENST00000393091 EFCAB14O75071 495 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 SOX10P56693 466 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 FAM189BP81408 668 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 STXBP4Q6ZWJ1 553 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 GUF1Q8N442 669 aaKnown RBP14.63□□□□□ -0.07
USP44-202ENST00000393091 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
USP44-202ENST00000393091 AGPAT5Q9NUQ2 364 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 PCDHA5Q9Y5H7 936 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 CENPFP49454 3210 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 CCDC85CA6NKD9 419 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 GPR182O15218 404 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 PQBP1O60828 265 aaKnown RBP14.62□□□□□ -0.07
USP44-202ENST00000393091 BAIAP3O94812 1187 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 PNOCQ13519 176 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 SFR1Q86XK3 245 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 ZBTB8OSQ8IWT0 167 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 CCDC47Q96A33 483 aaKnown RBP14.62□□□□□ -0.07
USP44-202ENST00000393091 TSPAN18Q96SJ8 248 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 KMT5AQ9NQR1 393 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 TMEM39AQ9NV64 488 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 AKT3Q9Y243 479 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 NBNO60934 754 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 VTNP04004 478 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 SFPQP23246 707 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP44-202ENST00000393091 BMP8BP34820 402 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 THPOP40225 353 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
USP44-202ENST00000393091 ASIC1P78348 528 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 FAM228AQ86W67 206 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 RHPN2Q8IUC4 686 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 METTL13Q8N6R0 699 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 KIAA0895Q8NCT3 520 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 FUCA2Q9BTY2 467 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 TMEM206Q9H813 350 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 MAN1B1Q9UKM7 699 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 TBX20Q9UMR3 447 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 TNFSF13BQ9Y275 285 aa14.62□□□□□ -0.07
USP44-202ENST00000393091 HOXD13P35453 343 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 HSP90AA2PQ14568 343 aaPredicted RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 FAM26FQ5R3K3 315 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 HAUS6Q7Z4H7 955 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 GRAMD1CQ8IYS0 662 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 TMEM40Q8WWA1 233 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 ZBTB10Q96DT7 871 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 ELAC1Q9H777 363 aaKnown RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 NOD1Q9Y239 953 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 A0A087WZ62 844 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 A0A1B0GUA9 196 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 TSPAN1O60635 241 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 KYAT1Q16773 422 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 ZCWPW2Q504Y3 356 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 CNKSR3Q6P9H4 555 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 MRPL10Q7Z7H8 261 aaKnown RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 TMEM199Q8N511 208 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 FDXACB1Q9BRP7 624 aaPredicted RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 KCTD10Q9H3F6 313 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 SUGCTQ9HAC7 445 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 IL23AQ9NPF7 189 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 TRAF3IP3Q9Y228 551 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 KIAA1671Q9BY89 1806 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 MAPK13O15264 365 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 KIF20AO95235 890 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 HOXA11P31270 313 aaPredicted RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 AFMP43652 599 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP44-202ENST00000393091 ZRSR1Q15695 479 aaKnown RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 FAM178BQ8IXR5 827 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
USP44-202ENST00000393091 MYCT1Q8N699 235 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 RGS18Q9NS28 235 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 EXOC1Q9NV70 894 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 TMEM63CQ9P1W3 806 aa14.61□□□□□ -0.07
USP44-202ENST00000393091 ZNF623O75123 536 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 ITGB8P26012 769 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
USP44-202ENST00000393091 PEX3P56589 373 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 DYMQ7RTS9 669 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms