RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 CCDC63Q8NA47 563 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 PBKQ96KB5 322 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 ZNF317Q96PQ6 595 aaPredicted RBP16.27■□□□□ 0.19
SHTN1-204ENST00000392903 IKZF4Q9H2S9 585 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 CETN3O15182 167 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 ASAP2O43150 1006 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 KCNA3P22001 575 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 KNOP1Q1ED39 458 aaKnown RBP16.26■□□□□ 0.19
SHTN1-204ENST00000392903 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 FOXR2Q6PJQ5 311 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 OTOP1Q7RTM1 612 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 TMC3Q7Z5M5 1100 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
SHTN1-204ENST00000392903 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 BTNL10A8MVZ5 291 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 KCNK3O14649 394 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 SLITRK3O94933 977 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 GCNT3O95395 438 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
SHTN1-204ENST00000392903 KCNH2Q12809 1159 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 RPS6KA1Q15418 735 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 DYDC2Q96IM9 177 aa16.26■□□□□ 0.19
SHTN1-204ENST00000392903 CLIC2O15247 247 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 SART1O43290 800 aaKnown RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 GNA14O95837 355 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 FLT3P36888 993 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 PIGWQ7Z7B1 504 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 SEC14L1Q92503 715 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 HSD17B14Q9BPX1 270 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 F8VZ95 297 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 SLC26A4O43511 780 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 KIF4AO95239 1232 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 ANP32DO95626 131 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 ACTN1P12814 892 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 CAP2P40123 477 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 EIF3BP55884 814 aaKnown RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 SPDYCQ5MJ68 293 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 CDCA2Q69YH5 1023 aaPredicted RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 BZW1Q7L1Q6 419 aaKnown RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 LMBR1Q8WVP7 490 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
SHTN1-204ENST00000392903 PKD2L1Q9P0L9 805 aa16.25■□□□□ 0.19
SHTN1-204ENST00000392903 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 CCDC188H7C350 402 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 CTNND1O60716 968 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 TBCAO75347 108 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 ARP10275 920 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 ALADP13716 330 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 DGKZQ13574 1117 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 RAPGEF1Q13905 1077 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 EDRF1Q3B7T1 1238 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 LDHDQ86WU2 507 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 TCP11Q8WWU5 503 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 RANBP17Q9H2T7 1088 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 TRPC6Q9Y210 931 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 GAS7O60861 476 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 SKAP2O75563 359 aaPredicted RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 PSMD10O75832 226 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 EYA4O95677 639 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 GCKP35557 465 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 CASP4P49662 377 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 MARSP56192 900 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 SPDL1Q96EA4 605 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 ARMCX3Q9UH62 379 aaPredicted RBP16.24■□□□□ 0.19
SHTN1-204ENST00000392903 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
SHTN1-204ENST00000392903 A0A087X0T9 212 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 DDX39AO00148 427 aaKnown RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 WNT10BO00744 389 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 AKAP3O75969 853 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 CLTAP09496 248 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 FAM228BP0C875 321 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 SLC9A1P19634 815 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 NMT1P30419 496 aaKnown RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 CXCL9Q07325 125 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 ZC2HC1CQ53FD0 456 aaPredicted RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 EPM2AIP1Q7L775 607 aaPredicted RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 NIM1KQ8IY84 436 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 MYCT1Q8N699 235 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 MDM1Q8TC05 714 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 ZNF577Q9BSK1 485 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 SLITRK6Q9H5Y7 841 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 NOP53Q9NZM5 478 aaKnown RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 WRAP73Q9P2S5 460 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms