RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ADAM17P78536 824 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 PPARAQ07869 468 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 RIN1Q13671 783 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 KRT40Q6A162 431 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 LHFPL2Q6ZUX7 228 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 DDX42Q86XP3 938 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 LYSMD2Q8IV50 215 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 C1QTNF3Q9BXJ4 246 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 AGO3Q9H9G7 860 aaKnown RBP8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 PLA2G3Q9NZ20 509 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
SNORA40.4-201ENST00000390971 PHLDB1Q86UU1 1377 aa8.09□□□□□ -1.12
SNORA40.4-201ENST00000390971 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 SEC24DO94855 1032 aaPredicted RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 COMTP21964 271 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 ENPP1P22413 925 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 CANXP27824 592 aaKnown RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 CD69Q07108 199 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 GRM7Q14831 915 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 ACAP1Q15027 740 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 LMBR1LQ6UX01 489 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 UNC5BQ8IZJ1 945 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 AHCYL2Q96HN2 611 aaKnown RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 RAX2Q96IS3 184 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 CDK5RAP1Q96SZ6 601 aaKnown RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 GPHA2Q96T91 129 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 FAM126AQ9BYI3 521 aaPredicted RBP8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 KLC2Q9H0B6 622 aa8.08□□□□□ -1.12
SNORA40.4-201ENST00000390971 LY86O95711 162 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 ZNF20P17024 532 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 SELENOPP49908 381 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 GAREM2Q75VX8 874 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 ADGRE4PQ86SQ3 457 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 SLC41A1Q8IVJ1 513 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 GLB1L2Q8IW92 636 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 LMBR1Q8WVP7 490 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 GPR20Q99678 358 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 KCTD10Q9H3F6 313 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 VTA1Q9NP79 307 aa8.07□□□□□ -1.12
SNORA40.4-201ENST00000390971 MTSS1O43312 755 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 LPLP06858 475 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 LGALS4P56470 323 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 SCAND1P57086 179 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 ADAM8P78325 824 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 MGAT5Q09328 741 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 FOXL1Q12952 345 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 SAFB2Q14151 953 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 ZNF585AQ6P3V2 769 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 TAS1R1Q7RTX1 841 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 FAM89AQ96GI7 184 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 MPHOSPH9Q99550 1183 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 FDXACB1Q9BRP7 624 aaPredicted RBP8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 SLC5A4Q9NY91 659 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 JAG2Q9Y219 1238 aa8.06□□□□□ -1.12
SNORA40.4-201ENST00000390971 PRKD3O94806 890 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 HHEXQ03014 270 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 SPIDRQ14159 915 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 CMTM4Q8IZR5 234 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 EDAQ92838 391 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 TMEM176AQ96HP8 235 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 PAWRQ96IZ0 340 aaKnown RBP8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 TCF25Q9BQ70 676 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 PUS7LQ9H0K6 701 aaKnown RBP8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 PRDM12Q9H4Q4 367 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 C14orf119Q9NWQ9 140 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
SNORA40.4-201ENST00000390971 A0A1W2PR48 441 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 UBE2QL1A1L167 161 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 ALDH1A2O94788 518 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 MTHFD2P13995 350 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 MRPS9P82933 396 aaKnown RBP8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 FAM111BQ6SJ93 734 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 Q6ZSN1 163 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 NECAB2Q7Z6G3 386 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 CMIPQ8IY22 773 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 D2HGDHQ8N465 521 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 PIK3C3Q8NEB9 887 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 ORAI2Q96SN7 254 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 ING3Q9NXR8 418 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 TSC22D4Q9Y3Q8 395 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 TESMINQ9Y4I5 508 aa8.04□□□□□ -1.12
SNORA40.4-201ENST00000390971 NRP1O14786 923 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 ACO1P21399 889 aaKnown RBP8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 NPEPPSP55786 919 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 MAMDC4Q6UXC1 1216 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 COG1Q8WTW3 980 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 ADOQ96SZ5 270 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 NCDNQ9UBB6 729 aa8.03□□□□□ -1.12
SNORA40.4-201ENST00000390971 EDARQ9UNE0 448 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms