RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SMC1AQ14683 1233 aaKnown RBP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CCL15Q16663 113 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 DEFB115Q30KQ5 88 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 KRBA2Q6ZNG9 492 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 TMTC3Q6ZXV5 915 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 FAM160B2Q86V87 743 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CCDC83Q8IWF9 413 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 MICAL1Q8TDZ2 1067 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CHURC1Q8WUH1 139 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 NANOS1Q8WY41 292 aaKnown RBP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 TNKS2Q9H2K2 1166 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 RPAP3Q9H6T3 665 aaPredicted RBP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 VIPAS39Q9H9C1 493 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 MAD2L2Q9UI95 211 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 FEM1BQ9UK73 627 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 STRIP2Q9ULQ0 834 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 AGTPBP1Q9UPW5 1226 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 VGLL3A8MV65 326 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 TMCO5BA8MYB1 307 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 PLA2G6O60733 806 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SMNDC1O75940 238 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 FLOT1O75955 427 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SMC2O95347 1197 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 PLEKHA8P1O95397 391 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 CDC27P30260 824 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 ADH7P40394 386 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 NOGQ13253 232 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 MOGSQ13724 837 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 TREML2Q5T2D2 321 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SYDE2Q5VT97 1194 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 LARP1BQ659C4 914 aaKnown RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 MCTP2Q6DN12 878 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 CYP4F22Q6NT55 531 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 CC2D1AQ6P1N0 951 aaPredicted RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SYT10Q6XYQ8 523 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 MMS22LQ6ZRQ5 1243 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SV2AQ7L0J3 742 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 LUZP1Q86V48 1076 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 FAM71BQ8TC56 605 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 LEO1Q8WVC0 666 aaPredicted RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 CPLX3Q8WVH0 158 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 BRI3BPQ8WY22 251 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 RUBCNQ92622 972 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 PPP1R13BQ96KQ4 1090 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 CAPNS2Q96L46 248 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 RNPC3Q96LT9 517 aaKnown RBP8.31□□□□□ -1.08
TRBV28-201ENST00000390400 SPZ1Q9BXG8 430 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 UBA5Q9GZZ9 404 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 DACT1Q9NYF0 836 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 DONSONQ9NYP3 566 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
TRBV28-201ENST00000390400 A0A087WUV0 522 aaPredicted RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 A0A1W2PQ27 194 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 A0A1W2PQ64 194 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 A0A1W2PQD8 194 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ERICH4A6NGS2 130 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 BTBD19C9JJ37 291 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ARHGAP6O43182 974 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CTSBP07858 339 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CCDC172P0C7W6 258 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 IFNAR1P17181 557 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 HOXA7P31268 230 aaPredicted RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SLC16A2P36021 539 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 C1QTNF8P60827 252 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 AKAP17AQ02040 695 aaKnown RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ST3GAL1Q11201 340 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SREBF2Q12772 1141 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 LRMPQ12912 555 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 MPP2Q14168 576 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CT47A1Q5JQC4 288 aaPredicted RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 BTNL9Q6UXG8 535 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CATSPERGQ6ZRH7 1159 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CCDC73Q6ZRK6 1079 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 GK5Q6ZS86 529 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 REC114Q7Z4M0 266 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CCAR1Q8IX12 1150 aaKnown RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 GOLGA1Q92805 767 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 ZNF396Q96N95 335 aaPredicted RBP8.3□□□□□ -1.08
TRBV28-201ENST00000390400 TRERF1Q96PN7 1200 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SLF1Q9BQI6 1058 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 PPP1R9AQ9ULJ8 1098 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 SLC45A1Q9Y2W3 748 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms