RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RASA3Q14644 834 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 AOC3Q16853 763 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 AGPAT1Q99943 283 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 ALAS1P13196 640 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 CRYMQ14894 314 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 IL17AQ16552 155 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 PRPF38AQ8NAV1 312 aaKnown RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 DTX3LQ8TDB6 740 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 DYDC2Q96IM9 177 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 FAM118BQ9BPY3 351 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 GINM1Q9NU53 330 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 UBOX5O94941 541 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 KLRK1P26718 216 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 DMP1Q13316 513 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 MAP7D1Q3KQU3 841 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 NAIF1Q69YI7 327 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 AGPSO00116 658 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 RASA1P20936 1047 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 PASD1Q8IV76 773 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRIM55Q9BYV6 548 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 IRX4P78413 519 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 COG7P83436 770 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 EDRF1Q3B7T1 1238 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 TTC16Q8NEE8 873 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 FAM129AQ9BZQ8 928 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 F8VZ95 297 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 ATP6V1G2O95670 118 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 PEX3P56589 373 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 ZC2HC1CQ53FD0 456 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 CENPUQ71F23 418 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 C4orf33Q8N1A6 199 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 SLC30A5Q8TAD4 765 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 SNF8Q96H20 258 aa14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-201ENST00000389328 RASSF10A6NK89 507 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 CYP26A1O43174 497 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 BMP3P12645 472 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 NQO1P15559 274 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 COMTP21964 271 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 BPIFB4P59827 614 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 COPS2P61201 443 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 IZUMO3Q5VZ72 239 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 NLRX1Q86UT6 975 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 C3orf20Q8ND61 904 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 KAT2BQ92831 832 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 WDR11Q9BZH6 1224 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 THAP2Q9H0W7 228 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 WNT8AQ9H1J5 351 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 ANKFY1Q9P2R3 1169 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 HAUS5O94927 633 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 CDC25CP30307 473 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 FMO5P49326 533 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 IRX1P78414 480 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 ACTRT1Q8TDG2 376 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 MTRQ99707 1265 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 H7C0C1 242 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 NDC80O14777 642 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRAPPC3O43617 180 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 STAM2O75886 525 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 ATP5OP48047 213 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 MAPK7Q13164 816 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 HADHQ16836 314 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 GLIS3Q8NEA6 775 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 TTC1Q99614 292 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 C11orf70Q9BRQ4 267 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 VCX3AQ9NNX9 186 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 OPLAHO14841 1288 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 KLRC4O43908 158 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 PFDN1O60925 122 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 PON1P27169 355 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 NT5C2P49902 561 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 MIIPQ5JXC2 388 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 SYDE2Q5VT97 1194 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 XXYLT1Q8NBI6 393 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 SH3GL3Q99963 347 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 SIK3Q9Y2K2 1263 aa14.05□□□□□ -0.16
TRAPPC9-201ENST00000389328 GOLGA8RI6L899 631 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 CASP4P49662 377 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 VAMP7P51809 220 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 EIF2AK1Q9BQI3 630 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms