RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SLC7A10Q9NS82 523 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 MAP3K2Q9Y2U5 619 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZNF451Q9Y4E5 1061 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 CTDP1Q9Y5B0 961 aaPredicted RBP0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 SYNE2Q8WXH0 6885 aaKnown RBP0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 A0A1B0GU03 582 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 H3BNX3 289 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 ACOT8O14734 319 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 GIPC1O14908 333 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 ORC4O43929 436 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 FGBP02675 491 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 LTFP02788 710 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 BPIFB4P59827 614 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 HTRA4P83105 476 aaPredicted RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 PLCB2Q00722 1185 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZNF211Q13398 564 aaPredicted RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 LARP1BQ659C4 914 aaKnown RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZNF324BQ6AW86 544 aaPredicted RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 SUMO4Q6EEV6 95 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 CYP4F22Q6NT55 531 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 NLRP10Q86W26 655 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 DMRTB1Q96MA1 342 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 CPPED1Q9BRF8 314 aaPredicted RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 GPRC5CQ9NQ84 441 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 FAM8A1Q9UBU6 413 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 ADAMTS1Q9UHI8 967 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 MTMR7Q9Y216 660 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 MTO1Q9Y2Z2 717 aaKnown RBP0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 CHST2Q9Y4C5 530 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 SQORQ9Y6N5 450 aa0.41□□□□□ -2.34
RNU6-540P-201ENST00000384622 CDKL5O76039 1030 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 F13A1P00488 732 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 RNASE9P60153 205 aaKnown RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 HNRNPKP61978 463 aaKnown RBP eCLIP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 AMPD2Q01433 879 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 SCAPQ12770 1279 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 NFATC4Q14934 902 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 INPP5JQ15735 1006 aaPredicted RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 AXDND1Q5T1B0 1012 aaPredicted RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 TDRD10Q5VZ19 366 aaKnown RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 ARMC6Q6NXE6 501 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 CNGA4Q8IV77 575 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 RBM12BQ8IXT5 1001 aaKnown RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 LYG1Q8N1E2 194 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 GCDHQ92947 438 aaPredicted RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 SLC7A6OSQ96CW6 309 aaPredicted RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 CHAMP1Q96JM3 812 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 TEX101Q9BY14 249 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 EPB41L1Q9H4G0 881 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 PLSCR4Q9NRQ2 329 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 SELENONQ9NZV5 590 aa0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 RBM8AQ9Y5S9 174 aaKnown RBP0.4□□□□□ -2.35
RNU6-540P-201ENST00000384622 PNMA6FA0A0J9YX94 578 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 FAM86C2PA6NEL3 165 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 DIRC3C9JPN6 131 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 H7BY64 318 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 ABLIM3O94929 683 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 TUBB4AP04350 444 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZNF10P21506 573 aaPredicted RBP0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 KCNJ5P48544 419 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 GAS1P54826 345 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 RRP1P56182 461 aaKnown RBP0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 CD83Q01151 205 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 TUSC3Q13454 348 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 TCEAL1Q15170 157 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 NEUROD2Q15784 382 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 TMEM200BQ69YZ2 307 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZNF549Q6P9A3 640 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 SYNPOQ8N3V7 929 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADCY4Q8NFM4 1077 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 WDR48Q8TAF3 677 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 CAMKK2Q96RR4 588 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 AIFM2Q9BRQ8 373 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 FOXP1Q9H334 677 aaPredicted RBP0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 GSTO2Q9H4Y5 243 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 TBCCD1Q9NVR7 557 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADAMTS5Q9UNA0 930 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 PCDHB14Q9Y5E9 798 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 PCDHB1Q9Y5F3 818 aa0.39□□□□□ -2.35
RNU6-540P-201ENST00000384622 IGKV6D-21A0A0A0MT36 114 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 LEFTY2O00292 366 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 H2AFYO75367 372 aaKnown RBP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 TP53P04637 393 aaPredicted RBP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 SPATA31D3P0C874 917 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 FGF3P11487 239 aaPredicted RBP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 RLBP1P12271 317 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 PLA2G2AP14555 144 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 NME1P15531 152 aaKnown RBP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 TNFRSF8P28908 595 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADAM8P78325 824 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 Q4G0T1 1027 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 METTL24Q5JXM2 366 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 KRT40Q6A162 431 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 IQCEQ6IPM2 695 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADAM5Q6NVV9 412 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 SHC4Q6S5L8 630 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 SPATA31D4Q6ZUB0 917 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 REC114Q7Z4M0 266 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 GLB1L3Q8NCI6 653 aaPredicted RBP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 SLC7A14Q8TBB6 771 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms