RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C6orf52Q5T4I8 152 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 PRMT9Q6P2P2 845 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 FAM9CQ8IZT9 166 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 KIFC2Q96AC6 838 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 SSU72Q9NP77 194 aaKnown RBP5.2□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF212Q9UDV6 495 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 KCNH4Q9UQ05 1017 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 KPNA4O00629 521 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-203ENST00000381196 CFBP00751 764 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 VIL1P09327 827 aaKnown RBP5.2□□□□□ -1.58
PTPRD-203ENST00000381196 ATF2P15336 505 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 LSP1P33241 339 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 MAGEA1P43355 309 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 COPB1P53618 953 aaKnown RBP5.2□□□□□ -1.58
PTPRD-203ENST00000381196 DOK7Q18PE1 504 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 LETM2Q2VYF4 491 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 C1orf228Q6PIY5 440 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 TRPM8Q7Z2W7 1104 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 CCDC105Q8IYK2 499 aa5.2□□□□□ -1.58
PTPRD-203ENST00000381196 PNPLA7Q6ZV29 1317 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TYW5A2RUC4 315 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TLR3O15455 904 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PYGMP11217 842 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 NPR1P16066 1061 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 SLC18A1P54219 525 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 THOC5Q13769 683 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PTGISQ16647 500 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PALM2Q8IXS6 379 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TGFBRAP1Q8WUH2 860 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 FTOQ9C0B1 505 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 XDHP47989 1333 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CRB1P82279 1406 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 MATN2O00339 956 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 P4HA2O15460 535 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CCDC159P0C7I6 412 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 XRCC5P13010 732 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TRIM69Q86WT6 500 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 APPBP2Q92624 585 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CCT8L2Q96SF2 557 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 WNT8AQ9H1J5 351 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RNF216Q9NWF9 866 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TUBE1Q9UJT0 475 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 M0R3G1 203 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 HEXIM1O94992 359 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 IL12AP29459 219 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RAB25P57735 213 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 LONRF3Q496Y0 759 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 MKL1Q969V6 931 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RBM41Q96IZ5 413 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 GOLPH3LQ9H4A5 285 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 BTBD7Q9P203 1132 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 MST1RQ04912 1400 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PLEKHG3A1L390 1219 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TNFAIP8O95379 198 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 COPS2P61201 443 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 ARMCX4Q5H9R4 360 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 FAM182BQ5T319 152 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF572Q7Z3I7 529 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 NUDCD1Q96RS6 583 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 FAM124BQ9H5Z6 455 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RXFP1Q9HBX9 757 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 SH3GLB1Q9Y371 365 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CDHR2Q9BYE9 1310 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 DDX39AO00148 427 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 BCAMP50895 628 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 MED21Q13503 144 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CNGA2Q16280 664 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 NT5DC1Q5TFE4 455 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CYB5D1Q6P9G0 228 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 DIS3LQ8TF46 1054 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RMDN1Q96DB5 314 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CYFIP2Q96F07 1278 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 DNAJC7Q99615 494 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 ABHD10Q9NUJ1 306 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 IPO11Q9UI26 975 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 KAT6AQ92794 2004 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PEX14O75381 377 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TAF5LO75529 589 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 XPAP23025 273 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 NFKBIAP25963 317 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RPS6KA3P51812 740 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 XRCC4Q13426 336 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 ERLEC1Q96DZ1 483 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CEP95Q96GE4 821 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 FAM161BQ96MY7 647 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 GCNAQ96QF7 691 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 RPS6KC1Q96S38 1066 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 UNC45AQ9H3U1 944 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 ADD3Q9UEY8 706 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 TBK1Q9UHD2 729 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 MRPL11Q9Y3B7 192 aaKnown RBP5.19□□□□□ -1.58
PTPRD-203ENST00000381196 PVALEFA0A1B0GWK0 134 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 DNAJB5O75953 348 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 DR1Q01658 176 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CYP4A11Q02928 519 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 GEN1Q17RS7 908 aa5.19□□□□□ -1.58
PTPRD-203ENST00000381196 CYP4A22Q5TCH4 519 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms