RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
CDX2-201ENST00000381020 GOLGA8SH3BPF8 625 aa13.5□□□□□ -0.25
CDX2-201ENST00000381020 TERF2Q15554 542 aa13.5□□□□□ -0.25
CDX2-201ENST00000381020 TMEM270Q6UE05 265 aa13.5□□□□□ -0.25
CDX2-201ENST00000381020 CDR2LQ86X02 465 aaPredicted RBP13.5□□□□□ -0.25
CDX2-201ENST00000381020 MTMR8Q96EF0 704 aa13.5□□□□□ -0.25
CDX2-201ENST00000381020 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
CDX2-201ENST00000381020 C19orf81C9J6K1 198 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 SLC16A3O15427 465 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 EGFRP00533 1210 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 EPHB4P54760 987 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 Q3C1V9 767 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RBM12Q9NTZ6 932 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 ATP8A1Q9Y2Q0 1164 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 MYO5AQ9Y4I1 1855 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RARRES1P49788 294 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 ZSCAN26Q16670 478 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 STK33Q9BYT3 514 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RAB17Q9H0T7 212 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RANBP17Q9H2T7 1088 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 KCNK9Q9NPC2 374 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 VWA5AO00534 786 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 TNNC2P02585 160 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 OSBPP22059 807 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 STAT5BP51692 787 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 FAM71BQ8TC56 605 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 ADAM21Q9UKJ8 722 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 CYP3A7-CYP3A51PA0A087WV96 503 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 EBAG9O00559 213 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 EIF3DO15371 548 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDX2-201ENST00000381020 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 PSMD10O75832 226 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 DGAT1O75907 488 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 H2AFXP16104 143 aaPredicted RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 CYP3A7P24462 503 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 CIITAP33076 1130 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 ACTR2P61160 394 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 TRIP13Q15645 432 aaPredicted RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 PBKQ96KB5 322 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 AGO4Q9HCK5 861 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 CNOT8Q9UFF9 292 aaKnown RBP13.49□□□□□ -0.25
CDX2-201ENST00000381020 DAAM1Q9Y4D1 1078 aa13.49□□□□□ -0.25
CDX2-201ENST00000381020 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 ATP9AO75110 1047 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 KCNMA1Q12791 1236 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 PGM5Q15124 567 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 CAPN12Q6ZSI9 719 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 SLC35C1Q96A29 364 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 PXMP2Q9NR77 195 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 AGO2Q9UKV8 859 aaKnown RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 XKR3Q5GH77 459 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 RNF149Q8NC42 400 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 PGK2P07205 417 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 KCTD19Q17RG1 926 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 BTNL9Q6UXG8 535 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 ARFGAP2Q8N6H7 521 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 SLC35G2Q8TBE7 412 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 OLFML3Q9NRN5 406 aa13.48□□□□□ -0.25
CDX2-201ENST00000381020 DNAJC17Q9NVM6 304 aaKnown RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 REXO2Q9Y3B8 237 aaKnown RBP13.48□□□□□ -0.25
CDX2-201ENST00000381020 NKRFO15226 690 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDX2-201ENST00000381020 PEX10O60683 326 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 KIF4AO95239 1232 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 IVLP07476 585 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 GGCXP38435 758 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 CNTN2Q02246 1040 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 NAB2Q15742 525 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 C10orf67Q8IYJ2 551 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 AGPAT1Q99943 283 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms