RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ARHGAP29Q52LW3 1261 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 SFMBT2Q5VUG0 894 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 PLEKHH3Q7Z736 793 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 DPP9Q86TI2 863 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 ATP8B4Q8TF62 1192 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 COPS5Q92905 334 aa23.45■■□□□ 1.34
GMDS-202ENST00000380815 MANSC4A6NHS7 340 aaPredicted RBP23.44■■□□□ 1.34
GMDS-202ENST00000380815 ANKRD63C9JTQ0 380 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 UCHL3P15374 230 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 GLRA2P23416 452 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 GTF2F1P35269 517 aaKnown RBP eCLIP23.44■■□□□ 1.342e-6■■■□□ 16.5
GMDS-202ENST00000380815 GNG11P61952 73 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 ZNF662Q6ZS27 426 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 EXOC8Q8IYI6 725 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 RDH13Q8NBN7 331 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 SMARCAD1Q9H4L7 1026 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.44■■□□□ 1.34
GMDS-202ENST00000380815 MYO6Q9UM54 1294 aa23.44■■□□□ 1.34
GMDS-202ENST00000380815 A0A0U1RQJ8 604 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 ACTN1P12814 892 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 LAMC2Q13753 1193 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 TMEM63BQ5T3F8 832 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 TAS1R3Q7RTX0 852 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 ASAP3Q8TDY4 903 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 ATRIPQ8WXE1 791 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 KATNBL1Q9H079 304 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 SIX2Q9NPC8 291 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 AIPL1Q9NZN9 384 aa23.43■■□□□ 1.34
GMDS-202ENST00000380815 SSU72P8A0A1W2PR75 194 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 KIF5CO60282 957 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 PLEKP08567 350 aaPredicted RBP23.42■■□□□ 1.34
GMDS-202ENST00000380815 TRIM49P0CI25 452 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 TRIM49CP0CI26 452 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 ARHGAP25P42331 645 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 VAMP7P51809 220 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 ARHGAP1Q07960 439 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 MAPK8IP2Q13387 824 aaPredicted RBP23.42■■□□□ 1.34
GMDS-202ENST00000380815 HGSNATQ68CP4 663 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 SLC39A4Q6P5W5 647 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 TRIM50Q86XT4 487 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 SLC15A5A6NIM6 579 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 HNRNPDLO14979 420 aaKnown RBP23.42■■□□□ 1.34
GMDS-202ENST00000380815 GAS2O43903 313 aaKnown RBP23.42■■□□□ 1.34
GMDS-202ENST00000380815 LCA5LO95447 670 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 PLCB4Q15147 1175 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 SLC9C1Q4G0N8 1177 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 CBWD6Q4V339 395 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 CBWD3Q5JTY5 395 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 CBWD5Q5RIA9 395 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 SAPCD2Q86UD0 394 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 EMID1Q96A84 441 aaPredicted RBP23.42■■□□□ 1.34
GMDS-202ENST00000380815 MAML3Q96JK9 1138 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 FBXL18Q96ME1 805 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 WDR24Q96S15 920 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 HAUS4Q9H6D7 363 aa23.42■■□□□ 1.34
GMDS-202ENST00000380815 DCAF8L1A6NGE4 600 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
GMDS-202ENST00000380815 FANCGO15287 622 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 P4HA2O15460 535 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 TLR2O60603 784 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 SNAI1O95863 264 aaPredicted RBP23.41■■□□□ 1.34
GMDS-202ENST00000380815 GH1P01241 217 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 SERPING1P05155 500 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 GARTP22102 1010 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 MARK3P27448 753 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 EIF4A3P38919 411 aaKnown RBP23.41■■□□□ 1.34
GMDS-202ENST00000380815 SNRNP35Q16560 246 aaKnown RBP23.41■■□□□ 1.34
GMDS-202ENST00000380815 DEPTORQ8TB45 409 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 MYO1AQ9UBC5 1043 aa23.41■■□□□ 1.34
GMDS-202ENST00000380815 ZBTB42B2RXF5 422 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 N4BP1O75113 896 aaKnown RBP23.4■■□□□ 1.34
GMDS-202ENST00000380815 KIF11P52732 1056 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 MYL7Q01449 175 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 STRN3Q13033 797 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 RAPGEF1Q13905 1077 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 SPA17Q15506 151 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 ASTE1Q2TB18 679 aaPredicted RBP23.4■■□□□ 1.34
GMDS-202ENST00000380815 RGMBQ6NW40 437 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 ZSWIM2Q8NEG5 633 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 DEF6Q9H4E7 631 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 L2HGDHQ9H9P8 463 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 SLC5A4Q9NY91 659 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 DAAM1Q9Y4D1 1078 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 FHOD1Q9Y613 1164 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 IGKV6-21A0A0C4DH24 114 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 CASQ1P31415 396 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 IER5Q5VY09 327 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 MSL3Q8N5Y2 521 aaKnown RBP23.4■■□□□ 1.34
GMDS-202ENST00000380815 TCP11Q8WWU5 503 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 POMGNT1Q8WZA1 660 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 SPAG5Q96R06 1193 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 TINF2Q9BSI4 451 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 IRX2Q9BZI1 471 aaPredicted RBP23.4■■□□□ 1.34
GMDS-202ENST00000380815 CPA4Q9UI42 421 aa23.4■■□□□ 1.34
GMDS-202ENST00000380815 ZNF236Q9UL36 1845 aa23.39■■□□□ 1.33
GMDS-202ENST00000380815 LRRIQ4A6NIV6 560 aa23.39■■□□□ 1.33
GMDS-202ENST00000380815 PMM2O15305 246 aa23.39■■□□□ 1.33
GMDS-202ENST00000380815 AKR1B10O60218 316 aa23.39■■□□□ 1.33
GMDS-202ENST00000380815 DLG4P78352 724 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms