RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 VGLL3A8MV65 326 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 H0YIN7 160 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 K7ENM7 598 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 INTS8Q75QN2 995 aaKnown RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 NEK9Q8TD19 979 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 FMO2Q99518 471 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 TRIM51Q9BSJ1 452 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 STRA6Q9BX79 667 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 TMEM206Q9H813 350 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 PPANQ9NQ55 473 aaKnown RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 SLX4Q8IY92 1834 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 FAM187AA6NFU0 413 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 PPP2R2AP63151 447 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 AOC3Q16853 763 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 SPDYCQ5MJ68 293 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 PADI6Q6TGC4 694 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 ADAT2Q7Z6V5 191 aaKnown RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 RIT2Q99578 217 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 ERP44Q9BS26 406 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 NR2E1Q9Y466 385 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 EIF3BP55884 814 aaKnown RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 ALCAMQ13740 583 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 DHX34Q14147 1143 aaKnown RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 STYK1Q6J9G0 422 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 LMO3Q8TAP4 145 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 CTTNBP2NLQ9P2B4 639 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 LARSQ9P2J5 1176 aaKnown RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 RASAL2Q9UJF2 1139 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 GGA2Q9UJY4 613 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 NOVA2Q9UNW9 492 aaKnown RBP17.65■□□□□ 0.42
VPS16-203ENST00000380469 COG5Q9UP83 839 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 EMSYQ7Z589 1322 aa17.65■□□□□ 0.42
VPS16-203ENST00000380469 MIF4GDA9UHW6 222 aaKnown RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 FTLP02792 175 aaPredicted RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 VAMP7P51809 220 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 HADHBP55084 474 aaKnown RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 ZNF211Q13398 564 aaPredicted RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 MAEAQ7L5Y9 396 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 MIER3Q7Z3K6 550 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 YTHDF3Q7Z739 585 aaKnown RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 FAM160B2Q86V87 743 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 ACCSQ96QU6 501 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 MXRA8Q9BRK3 442 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 PCIF1Q9H4Z3 704 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 ATP8A1Q9Y2Q0 1164 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 ALG6Q9Y672 507 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 MYH11P35749 1972 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 PFASO15067 1338 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 GMNCA6NCL1 334 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 DDX39AO00148 427 aaKnown RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 P4HA2O15460 535 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 PPFIA2O75334 1257 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 MAPK7Q13164 816 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 TNIP1Q15025 636 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 DUPD1Q68J44 220 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 PALB2Q86YC2 1186 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 DAW1Q8N136 415 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 C3orf20Q8ND61 904 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
VPS16-203ENST00000380469 SLC12A6Q9UHW9 1150 aa17.64■□□□□ 0.41
VPS16-203ENST00000380469 EP400Q96L91 3159 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 FAM170AA1A519 330 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 HSPA6P17066 643 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 CDR1P51861 262 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 GPC5P78333 572 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 KCTD19Q17RG1 926 aaPredicted RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 C11orf63Q6NUN7 778 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 ATP8B4Q8TF62 1192 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 SLC20A1Q8WUM9 679 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 ZBTB21Q9ULJ3 1066 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 PLA2G6O60733 806 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 P4HBP07237 508 aaKnown RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 DLG4P78352 724 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 RNF187Q5TA31 235 aaPredicted RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 RPUSD2Q8IZ73 545 aaKnown RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 MAGOHBQ96A72 148 aaKnown RBP17.63■□□□□ 0.41
VPS16-203ENST00000380469 SYNGAP1Q96PV0 1343 aa17.63■□□□□ 0.41
VPS16-203ENST00000380469 VCAM1P19320 739 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 COPB2P35606 906 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 TCEAL1Q15170 157 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
VPS16-203ENST00000380469 MMS22LQ6ZRQ5 1243 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 HOOK3Q86VS8 718 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 LOXHD1Q8IVV2 1947 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 ALG3Q92685 438 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 PSMD1Q99460 953 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms