RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 OMA1Q96E52 524 aa11.12□□□□□ -0.63
CCDC85C-201ENST00000380243 ACCSQ96QU6 501 aa11.12□□□□□ -0.63
CCDC85C-201ENST00000380243 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-201ENST00000380243 BAZ2BQ9UIF8 2168 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-201ENST00000380243 KPNA7A9QM74 516 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZNF555Q8NEP9 628 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ST13P5Q8NFI4 369 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 EDEM3Q9BZQ6 932 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 RAD51CO43502 376 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 MLH1P40692 756 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TEX12Q9BXU0 123 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 STMN3Q9NZ72 180 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TRIM25Q14258 630 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 SCUBE1Q8IWY4 988 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 CIAO1O76071 339 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ELF3P78545 371 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZNF211Q13398 564 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 USP17L12C9JPN9 530 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 USP17L21D6R901 530 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 RFC4P35249 363 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 VPS39Q96JC1 886 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 HEMGNQ9BXL5 484 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TMBIM4Q9HC24 238 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 DDX39AO00148 427 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZBED1O96006 694 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 LONRF1Q17RB8 773 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 CASKIN2Q8WXE0 1202 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ASPSCR1Q9BZE9 553 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 CYP26B1Q9NR63 512 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TRIM49BA6NDI0 452 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 MXI1P50539 228 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 YWHAHQ04917 246 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 STX3Q13277 289 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TRIM51Q9BSJ1 452 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 HNRNPRO43390 633 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
CCDC85C-201ENST00000380243 NAB2Q15742 525 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 MAGEB18Q96M61 343 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 ACAP3Q96P50 834 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 UNC45AQ9H3U1 944 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 USH1GQ495M9 461 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 WLSQ5T9L3 541 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 AIM2O14862 343 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 SKA2Q8WVK7 121 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 PABPC4Q13310 644 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 TRIM63Q969Q1 353 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 MYBL1P10243 752 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 FOXP3Q9BZS1 431 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 SMARCAL1Q9NZC9 954 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 NPATQ14207 1427 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 GSNP06396 782 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 HSPA1AP0DMV8 641 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 HSPA1BP0DMV9 641 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 RFFLQ8WZ73 363 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 GPATCH8Q9UKJ3 1502 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 OTUD4Q01804 1114 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 DEPDC1Q5TB30 811 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 LUZP2Q86TE4 346 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 RAPGEF3O95398 923 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 LIG4P49917 911 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 DNAJC12Q9UKB3 198 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 ADORA1P30542 326 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 EXOC8Q8IYI6 725 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 MRPL1Q9BYD6 325 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 CYLDQ9NQC7 956 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 CASP1P29466 404 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 MICU2Q8IYU8 434 aa11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 MARCOQ9UEW3 520 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-201ENST00000380243 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms