RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 SPIRE2Q8WWL2 714 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 LINC01599Q8WXQ3 324 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 DNAJC19Q96DA6 116 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 LRRC27Q9C0I9 530 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 FZD8Q9H461 694 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 RGS18Q9NS28 235 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 CEP290O15078 2479 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 GOLGA6L4A6NEF3 574 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 ACTN4O43707 911 aaKnown RBP20.7■□□□□ 0.9
SSU72-203ENST00000378725 MGEA5O60502 916 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 KRT18P05783 430 aaKnown RBP20.7■□□□□ 0.9
SSU72-203ENST00000378725 SYKP43405 635 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 AMPD3Q01432 767 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 DMP1Q13316 513 aaPredicted RBP20.7■□□□□ 0.9
SSU72-203ENST00000378725 AMHR2Q16671 573 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 FAM187BQ17R55 369 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 LONRF3Q496Y0 759 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 CATSPER4Q7RTX7 472 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 ZBTB8OSQ8IWT0 167 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 DEPTORQ8TB45 409 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 KCNN1Q92952 543 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 LARSQ9P2J5 1176 aaKnown RBP20.7■□□□□ 0.9
SSU72-203ENST00000378725 SERTAD1Q9UHV2 236 aa20.7■□□□□ 0.9
SSU72-203ENST00000378725 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.69■□□□□ 0.9
SSU72-203ENST00000378725 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.69■□□□□ 0.9
SSU72-203ENST00000378725 INO80B-WBP1J3KQ70 363 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 HOXA11P31270 313 aaPredicted RBP20.69■□□□□ 0.9
SSU72-203ENST00000378725 KCNJ6P48051 423 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 EFNA5P52803 228 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 FAM189BP81408 668 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 DEFB103AP81534 67 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 PPP4R3CPQ6ZMV5 832 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 DYMQ7RTS9 669 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 CRIPAKQ8N1N5 446 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 STAMQ92783 540 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 SLC9A7Q96T83 725 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 ADAM2Q99965 735 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 CCDC113Q9H0I3 377 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 TMEM134Q9H6X4 195 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 PARVGQ9HBI0 331 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 KMT5AQ9NQR1 393 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 AGPAT5Q9NUQ2 364 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 ARHGAP28Q9P2N2 729 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 ADGRA3Q8IWK6 1321 aa20.69■□□□□ 0.9
SSU72-203ENST00000378725 CCDC169A6NNP5 214 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 FAM13AO94988 1023 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 AMHP03971 560 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 ATP2A2P16615 1042 aaKnown RBP20.68■□□□□ 0.9
SSU72-203ENST00000378725 ZSCAN20P17040 1043 aaPredicted RBP20.68■□□□□ 0.9
SSU72-203ENST00000378725 AXLP30530 894 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 CEP57L1Q8IYX8 460 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 MYCT1Q8N699 235 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 TOP1MTQ969P6 601 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 PRIMPOLQ96LW4 560 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 KIFC3Q9BVG8 833 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 TRAIPQ9BWF2 469 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 TRIM9Q9C026 710 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 C1orf112Q9NSG2 853 aa20.68■□□□□ 0.9
SSU72-203ENST00000378725 PRMT7Q9NVM4 692 aaPredicted RBP20.68■□□□□ 0.9
SSU72-203ENST00000378725 FRMD3A2A2Y4 597 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 DENND3A2RUS2 1198 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 C9IYK1 514 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 TSPAN1O60635 241 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 TBCAO75347 108 aaKnown RBP20.67■□□□□ 0.9
SSU72-203ENST00000378725 ZNF202O95125 648 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 SMTNP53814 917 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 MAPK6Q16659 721 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 TPRNQ4KMQ1 711 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 SLC24A5Q71RS6 500 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
SSU72-203ENST00000378725 TMEM161BQ8NDZ6 487 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 ENGASEQ8NFI3 743 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 PAGE5Q96GU1 130 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 FIZ1Q96SL8 496 aa20.67■□□□□ 0.9
SSU72-203ENST00000378725 K7ERI5 159 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 ACKR2O00590 384 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 SLC16A4O15374 487 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 TRAK2O60296 914 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 ERLIN2O94905 339 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 SCP2P22307 547 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 NCKAP1LP55160 1127 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 NCBP1Q09161 790 aaKnown RBP20.66■□□□□ 0.9
SSU72-203ENST00000378725 SNW1Q13573 536 aaKnown RBP20.66■□□□□ 0.9
SSU72-203ENST00000378725 HABP4Q5JVS0 413 aaKnown RBP20.66■□□□□ 0.9
SSU72-203ENST00000378725 FAM109BQ6ICB4 259 aaPredicted RBP20.66■□□□□ 0.9
SSU72-203ENST00000378725 HERC6Q8IVU3 1022 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 SEL1LQ9UBV2 794 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 PIN4Q9Y237 131 aaKnown RBP20.66■□□□□ 0.9
SSU72-203ENST00000378725 PHLPP2Q6ZVD8 1323 aa20.66■□□□□ 0.9
SSU72-203ENST00000378725 A0A0U1RQF3 1178 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 A0A1B0GUA9 196 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 H0YCG3 227 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 GADD45BO75293 160 aaPredicted RBP20.65■□□□□ 0.9
SSU72-203ENST00000378725 MAPTP10636 758 aaKnown RBP20.65■□□□□ 0.9
SSU72-203ENST00000378725 GAP43P17677 238 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 ARF4P18085 180 aaPredicted RBP20.65■□□□□ 0.9
SSU72-203ENST00000378725 SARSP49591 514 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms