RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 CCDC188H7C350 402 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 SGK1O00141 431 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 EML1O00423 815 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 OPLAHO14841 1288 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 MSH4O15457 936 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 BRAFP15056 766 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.257e-8■■□□□ 11.9
PPM1B-204ENST00000378551 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 CHMP6Q96FZ7 201 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 PWWP2AQ96N64 755 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 CA4P22748 312 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 PRUNE1Q86TP1 453 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 SLC40A1Q9NP59 571 aa16.61■□□□□ 0.25
PPM1B-204ENST00000378551 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
PPM1B-204ENST00000378551 MYH8P13535 1937 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 LRRD1A4D1F6 860 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 GIT2Q14161 759 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 RNF207Q6ZRF8 634 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 USP37Q86T82 979 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 C4orf33Q8N1A6 199 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 NR2E1Q9Y466 385 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 FOSP01100 380 aaPredicted RBP16.6■□□□□ 0.25
PPM1B-204ENST00000378551 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 LRRC34Q8IZ02 419 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 KRT35Q92764 455 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 SHBGP04278 402 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 PIK3CAP42336 1068 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 RCN2Q14257 317 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 PPP2R5AQ15172 486 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.6■□□□□ 0.25
PPM1B-204ENST00000378551 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
PPM1B-204ENST00000378551 EXOC1LA0A1B0GW35 172 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 RASSF10A6NK89 507 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 DDX3XO00571 662 aaKnown RBP eCLIP16.59■□□□□ 0.258e-9■■■■□ 21.8
PPM1B-204ENST00000378551 MARK3P27448 753 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 VAMP7P51809 220 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 MEI1Q5TIA1 1274 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 SAYSD1Q9NPB0 183 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 SUN1O94901 812 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 PDHA1P08559 390 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 ZWILCHQ9H900 591 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 STRN3Q13033 797 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 DMP1Q13316 513 aaPredicted RBP16.59■□□□□ 0.25
PPM1B-204ENST00000378551 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 CASC4Q6P4E1 433 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 CDR2LQ86X02 465 aaPredicted RBP16.59■□□□□ 0.25
PPM1B-204ENST00000378551 ZNF526Q8TF50 670 aaPredicted RBP16.59■□□□□ 0.25
PPM1B-204ENST00000378551 L3MBTL1Q9Y468 752 aa16.59■□□□□ 0.25
PPM1B-204ENST00000378551 SYNJ2BP-COX16A0A087WUM0 186 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 RASA4BC9J798 803 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 RASA4O43374 803 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 ACOT2P49753 483 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 GPC5P78333 572 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 KRT17Q04695 432 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 TRPC3Q13507 836 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 RINT1Q6NUQ1 792 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 ANKMY2Q8IV38 441 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 CCDC89Q8N998 374 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 MCUR1Q96AQ8 359 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 ISCUQ9H1K1 167 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 COX16Q9P0S2 106 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 MRPL11Q9Y3B7 192 aaKnown RBP16.58■□□□□ 0.25
PPM1B-204ENST00000378551 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.25
PPM1B-204ENST00000378551 CHUKO15111 745 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 GJB6O95452 261 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 ARP10275 920 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 ZNF844Q08AG5 666 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 LIN9Q5TKA1 542 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 TMEM270Q6UE05 265 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 AGPAT1Q99943 283 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 NEUROG2Q9H2A3 272 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 SGPL1O95470 568 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 RWDD2BP57060 319 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 IGBP1P78318 339 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 CBWD6Q4V339 395 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 CBWD3Q5JTY5 395 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 CBWD5Q5RIA9 395 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 LLGL2Q6P1M3 1020 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 PARP9Q8IXQ6 854 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 VPS52Q8N1B4 723 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 DNAJC19Q96DA6 116 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 TRIM7Q9C029 511 aa16.58■□□□□ 0.24
PPM1B-204ENST00000378551 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
PPM1B-204ENST00000378551 PPP1R11O60927 126 aaPredicted RBP16.57■□□□□ 0.24
PPM1B-204ENST00000378551 FAM107AO95990 144 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms