RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NMT1P30419 496 aaKnown RBP19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 GNA15P30679 374 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 ZNF668Q96K58 619 aaPredicted RBP19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 STAP1Q9ULZ2 295 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 PODXLO00592 558 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 MAGEB2O15479 319 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 ZMYND10O75800 440 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 KPNA2P52292 529 aaKnown RBP19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 ASPHQ12797 758 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 SCN4BQ8IWT1 228 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 RSRC1Q96IZ7 334 aaKnown RBP19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 MXRA8Q9BRK3 442 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 MTFR1LQ9H019 292 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 VCXQ9H320 206 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 SLITRK6Q9H5Y7 841 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 FGFR2P21802 821 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 PRAMEF18Q5VWM3 479 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 ZNF449Q6P9G9 518 aa19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 RAB44Q7Z6P3 723 aaPredicted RBP19.14■□□□□ 0.65
CLSTN1-202ENST00000377298 TRIM49P0CI25 452 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 TRIM49CP0CI26 452 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 CUL1Q13616 776 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 PPP6R3Q5H9R7 873 aaPredicted RBP19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 PASD1Q8IV76 773 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 FMO2Q99518 471 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 AP1M1Q9BXS5 423 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 FAM217BQ9NTX9 383 aaPredicted RBP19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 MYBL1P10243 752 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 SDC4P31431 198 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 ANKRD40Q6AI12 368 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 VCX3BQ9H321 246 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 M0QYV0 167 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 KIF12Q96FN5 646 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 ACAP3Q96P50 834 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 TTC26A0AVF1 554 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 ZBBXA8MT70 800 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 NFKBIAP25963 317 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 EPHB1P54762 984 aa19.13■□□□□ 0.65
CLSTN1-202ENST00000377298 CCL15-CCL14A0A0B4J2E2 113 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 CCL15Q16663 113 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 GLE1Q53GS7 698 aaKnown RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 CENPUQ71F23 418 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 SENP2Q9HC62 589 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 RHOBTB3O94955 611 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 RFC5P40937 340 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 TROAPQ12815 778 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 TLK1Q9UKI8 766 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 GFPT1Q06210 699 aaPredicted RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 BBS9Q3SYG4 887 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 MAP3K21Q5TCX8 1036 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 DHX40Q8IX18 779 aaKnown RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 DYNC1LI2O43237 492 aaPredicted RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 COG7P83436 770 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 ARID5BQ14865 1188 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 PSMD6Q15008 389 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 TRIP13Q15645 432 aaPredicted RBP19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 BCAS4Q8TDM0 211 aa19.12■□□□□ 0.65
CLSTN1-202ENST00000377298 MORC4Q8TE76 937 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 TEX33O43247 280 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 GPC4O75487 556 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 PLS3P13797 630 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 FDPSP14324 419 aaKnown RBP19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 CAP2P40123 477 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 KCTD16Q68DU8 428 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ADSSL1Q8N142 457 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 SCFD2Q8WU76 684 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ASAP2O43150 1006 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 MT-ND3P03897 115 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 EIF3BP55884 814 aaKnown RBP19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 DPYDQ12882 1025 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 LRRC31Q6UY01 552 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ZNF564Q8TBZ8 553 aaPredicted RBP19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ATG4CQ96DT6 458 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 KLC2Q9H0B6 622 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 SMYD2Q9NRG4 433 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 A8MXQ7 604 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ZWINTO95229 277 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 ELMOD1Q8N336 334 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 REEP2Q9BRK0 252 aa19.11■□□□□ 0.65
CLSTN1-202ENST00000377298 SOX5P35711 763 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 PSMC1P62191 440 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 DAGLBQ8NCG7 672 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 IP6K2Q9UHH9 426 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 MAD2L2Q9UI95 211 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 SLIT1O75093 1534 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 HUNKP57058 714 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 EFCC1Q9HA90 598 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 FTLP02792 175 aaPredicted RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 FXR2P51116 673 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 TSTA3Q13630 321 aaPredicted RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 RDM1Q8NG50 284 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 PARD6BQ9BYG5 372 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms