RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-202ENST00000376839 ALG6Q9Y672 507 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 GOLGA6L10A0A0M3HER8 536 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 TISP43B9A030 160 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 PIK3CDO00329 1044 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 KIAA0391O15091 583 aaKnown RBP14.3□□□□□ -0.12
ACTN1-202ENST00000376839 KRT13P13646 458 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 USP8P40818 1118 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 BFSP1Q12934 665 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 KIF22Q14807 665 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 ZDHHC14Q8IZN3 488 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 C3orf20Q8ND61 904 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 IDI2Q9BXS1 227 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
ACTN1-202ENST00000376839 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 TMEM110-MUSTN1A8MSY1 372 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 EXOC3O60645 756 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 DRD4P21917 467 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 MAPK7Q13164 816 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 KIAA1755Q5JYT7 1200 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-202ENST00000376839 AGPAT1Q99943 283 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 SMIM23A6NLE4 172 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 RASSF9O75901 435 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 PRELPP51888 382 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 SMTNP53814 917 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 PMS2P54278 862 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 BTNL9Q6UXG8 535 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 ARHGEF19Q8IW93 802 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 CACNA2D3Q8IZS8 1091 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 SLC5A5Q92911 643 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 NAP1L3Q99457 506 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-202ENST00000376839 SLC40A1Q9NP59 571 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 GRHL1Q9NZI5 618 aa14.29□□□□□ -0.12
ACTN1-202ENST00000376839 GOLGA6L7A0A1B0GV03 622 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 GAS7O60861 476 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 FTLP02792 175 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ECE1P42892 770 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 PTGIRP43119 386 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 EIF3BP55884 814 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ANKRD20A8PQ5CZ79 823 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CPNE8Q86YQ8 564 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 DAW1Q8N136 415 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 PRELID2Q8N945 189 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 NEK9Q8TD19 979 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 XPO6Q96QU8 1125 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 PABPC3Q9H361 631 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 UNC45AQ9H3U1 944 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 PCIF1Q9H4Z3 704 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CD248Q9HCU0 757 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 UBE2TQ9NPD8 197 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CTTNBP2NLQ9P2B4 639 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 RPTORQ8N122 1335 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 RBBP6Q7Z6E9 1792 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 TLDC2A0PJX2 215 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ATP2C2O75185 946 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 NUDT17P0C025 328 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.124e-7■■■■■ 34.5
ACTN1-202ENST00000376839 DRP2Q13474 957 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ERMARDQ5T6L9 678 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 SYCP3Q8IZU3 236 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 UHMK1Q8TAS1 419 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CCDC114Q96M63 670 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.28□□□□□ -0.122e-13■■■■■ 158.6
ACTN1-202ENST00000376839 KLC4Q9NSK0 619 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 UBE4BO95155 1302 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 HIP1RO75146 1068 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CCDC172P0C7W6 258 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ARP10275 920 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 RPL21P46778 160 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
ACTN1-202ENST00000376839 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 HOOK3Q86VS8 718 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 KAT5Q92993 513 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 ADAM7Q9H2U9 754 aa14.28□□□□□ -0.12
ACTN1-202ENST00000376839 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-202ENST00000376839 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.12
ACTN1-202ENST00000376839 PHF2O75151 1096 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 CHN1P15882 459 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-202ENST00000376839 PPP3CAQ08209 521 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 SLC29A2Q14542 456 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 PPP2R5EQ16537 467 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 GKAP1Q5VSY0 366 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-202ENST00000376839 DENND2CQ68D51 928 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 RHOT2Q8IXI1 618 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 NACC1Q96RE7 527 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms