RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GOLGA6BA6NDN3 693 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 P4HA2O15460 535 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 CHMP2AO43633 222 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 ZEB2O60315 1214 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 BUB1BO60566 1050 aaPredicted RBP10.43□□□□□ -0.74
TRIM39-202ENST00000376659 ATP9AO75110 1047 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 PEX5P50542 639 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 ARID5AQ03989 594 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 SRLQ86TD4 932 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 BSNDQ8WZ55 320 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 ALG3Q92685 438 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 CBWD1Q9BRT8 395 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 LMAN1P49257 510 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 TRAF1Q13077 416 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 GLYCTKQ8IVS8 523 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 FAM71AQ8IYT1 594 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 SLC35G2Q8TBE7 412 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 RFFLQ8WZ73 363 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 KRT12Q99456 494 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 GOLGA8KD6RF30 607 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 DPEP1P16444 411 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PTGIRP43119 386 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 TNNT3P45378 269 aaPredicted RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PADI6Q6TGC4 694 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 KDM7AQ6ZMT4 941 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ANO5Q75V66 913 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 TMEM161BQ8NDZ6 487 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 THAP2Q9H0W7 228 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PXMP2Q9NR77 195 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ZNRF3Q9ULT6 936 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ATXN2Q99700 1313 aaKnown RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 FOXN3O00409 490 aaPredicted RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 FAM13AO94988 1023 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 P4HBP07237 508 aaKnown RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 STAT1P42224 750 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 SNRPFP62306 86 aaKnown RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 CXCL9Q07325 125 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 DLGAP5Q15398 846 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 MIGA2Q7L4E1 593 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 MAP4K3Q8IVH8 894 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 NTPCRQ9BSD7 190 aaKnown RBP10.42□□□□□ -0.74
TRIM39-202ENST00000376659 EPB41L5Q9HCM4 733 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 G3V3G9 751 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 NFKBIEO00221 500 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PHACTR2O75167 634 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 FLOT1O75955 427 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 KCNA2P16389 499 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 CTNNA2P26232 953 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 PSEN1P49768 467 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 MYL7Q01449 175 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ALCAMQ13740 583 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ZDHHC24Q6UX98 284 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 FAM178BQ8IXR5 827 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 TTLL6Q8N841 843 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 EPS8L1Q8TE68 723 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 LPAR1Q92633 364 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 TMEM117Q9H0C3 514 aa10.42□□□□□ -0.74
TRIM39-202ENST00000376659 ANKRD63C9JTQ0 380 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 RAD21O60216 631 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 MARCH6O60337 910 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 IRAK1P51617 712 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 PTENP60484 403 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 GUCY2DQ02846 1103 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 SLC20A2Q08357 652 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 KCTD19Q17RG1 926 aaPredicted RBP10.41□□□□□ -0.74
TRIM39-202ENST00000376659 ODR4Q5SWX8 454 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 KAT5Q92993 513 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 HOOK2Q96ED9 719 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 MFSD14AQ96MC6 490 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 TIPINQ9BVW5 301 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 GINM1Q9NU53 330 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF862O60290 1169 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 WNT7BP56706 349 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 CYP1B1Q16678 543 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 TNFAIP8L3Q5GJ75 292 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 UBAP2Q5T6F2 1119 aaKnown RBP10.41□□□□□ -0.74
TRIM39-202ENST00000376659 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 NOP9Q86U38 636 aaKnown RBP10.41□□□□□ -0.74
TRIM39-202ENST00000376659 IFT20Q8IY31 132 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 SHC3Q92529 594 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 CCDC102AQ96A19 550 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 TAAR1Q96RJ0 339 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF341Q9BYN7 854 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 HSPBP1Q9NZL4 362 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 SLC12A6Q9UHW9 1150 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF236Q9UL36 1845 aa10.41□□□□□ -0.74
TRIM39-202ENST00000376659 EMSYQ7Z589 1322 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms