RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PRPF6O94906 941 aaKnown RBP25.22■■□□□ 1.63
HLA-C-202ENST00000376237 PAK1Q13153 545 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 CENPPQ6IPU0 288 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 KLHL10Q6JEL2 608 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 FOXR2Q6PJQ5 311 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 NLRP7Q8WX94 980 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 ACCSQ96QU6 501 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 KIFC3Q9BVG8 833 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 TRMT13Q9NUP7 481 aaKnown RBP25.22■■□□□ 1.63
HLA-C-202ENST00000376237 RWDD2AQ9UIY3 292 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 TBX20Q9UMR3 447 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 EXOC7Q9UPT5 735 aa25.22■■□□□ 1.63
HLA-C-202ENST00000376237 MYH11P35749 1972 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 BICDL2A1A5D9 508 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 CAND2O75155 1236 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 CCNE1P24864 410 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 STRN3Q13033 797 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 FAM200AQ8TCP9 573 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 SCLT1Q96NL6 688 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 INO80BQ9C086 356 aaPredicted RBP25.21■■□□□ 1.63
HLA-C-202ENST00000376237 ADAMTS10Q9H324 1103 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 C11orf49Q9H6J7 331 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 IFT122Q9HBG6 1241 aa25.21■■□□□ 1.63
HLA-C-202ENST00000376237 A0A087WZ62 844 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 M0QZ92 97 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 B4GALT4O60513 344 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 GPR32O75388 356 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 SRGAP1Q7Z6B7 1085 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 NECAB2Q7Z6G3 386 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 MAP4K3Q8IVH8 894 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 FAM126BQ8IXS8 530 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 NELFBQ8WX92 580 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 P2RX5Q93086 422 aa25.2■■□□□ 1.62
HLA-C-202ENST00000376237 FDXACB1Q9BRP7 624 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-202ENST00000376237 GCOM2Q9BZD3 368 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-202ENST00000376237 TLR3O15455 904 aaKnown RBP25.19■■□□□ 1.62
HLA-C-202ENST00000376237 LRRC63Q05C16 580 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 SNX17Q15036 470 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 MAPK6Q16659 721 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 KIZQ2M2Z5 673 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 ANKRD33Q7Z3H0 272 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 NELFCDQ8IXH7 590 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 SYCP3Q8IZU3 236 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 PAWRQ96IZ0 340 aaKnown RBP25.19■■□□□ 1.62
HLA-C-202ENST00000376237 TOX2Q96NM4 488 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 TRPV6Q9H1D0 765 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 KCTD10Q9H3F6 313 aa25.19■■□□□ 1.62
HLA-C-202ENST00000376237 EVPLQ92817 2033 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 PDXKO00764 312 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 CRYBB1P53674 252 aaPredicted RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 SNRPFP62306 86 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 MRPS6P82932 125 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 PCBP1Q15365 356 aaKnown RBP eCLIP25.18■■□□□ 1.625e-7■■□□□ 14.4
HLA-C-202ENST00000376237 PPP4R3CPQ6ZMV5 832 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 GOLGA5Q8TBA6 731 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 ENOX1Q8TC92 643 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 DIS3LQ8TF46 1054 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 TSG101Q99816 390 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 CELF4Q9BZC1 486 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 CGNQ9P2M7 1197 aaKnown RBP25.18■■□□□ 1.62
HLA-C-202ENST00000376237 CTNND2Q9UQB3 1225 aa25.18■■□□□ 1.62
HLA-C-202ENST00000376237 SMTNL1A8MU46 457 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 IKBKBO14920 756 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 CD4P01730 458 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 HOXD13P35453 343 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 KCNA1Q09470 495 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 HS2ST1Q7LGA3 356 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 CCDC113Q9H0I3 377 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 GBP3Q9H0R5 595 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 FZD8Q9H461 694 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 TYW1Q9NV66 732 aaKnown RBP25.17■■□□□ 1.62
HLA-C-202ENST00000376237 PRMT7Q9NVM4 692 aaPredicted RBP25.17■■□□□ 1.62
HLA-C-202ENST00000376237 TRAF3IP3Q9Y228 551 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 DCDC2CA8MYV0 355 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 INO80B-WBP1J3KQ70 363 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 THPOP40225 353 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 ATN1P54259 1190 aaPredicted RBP25.17■■□□□ 1.62
HLA-C-202ENST00000376237 TMEM62Q0P6H9 643 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 FAM187BQ17R55 369 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 TAS1R3Q7RTX0 852 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 CCDC155Q8N6L0 562 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 CAGE1Q8TC20 777 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 ZNF668Q96K58 619 aaPredicted RBP25.17■■□□□ 1.62
HLA-C-202ENST00000376237 PRIMPOLQ96LW4 560 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 SEMA6BQ9H3T3 888 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 CBX8Q9HC52 389 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 TRPV2Q9Y5S1 764 aa25.17■■□□□ 1.62
HLA-C-202ENST00000376237 BECN2A8MW95 431 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 CALUO43852 315 aaPredicted RBP25.16■■□□□ 1.62
HLA-C-202ENST00000376237 DARSP14868 501 aaKnown RBP25.16■■□□□ 1.62
HLA-C-202ENST00000376237 EIF4BP23588 611 aaKnown RBP25.16■■□□□ 1.62
HLA-C-202ENST00000376237 MYL5Q02045 173 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 MBTD1Q05BQ5 628 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 RBL2Q08999 1139 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 TRIM71Q2Q1W2 868 aaKnown RBP25.16■■□□□ 1.62
HLA-C-202ENST00000376237 ZCWPW2Q504Y3 356 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 GAS2L3Q86XJ1 694 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 WNT8BQ93098 351 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 PPP1R16BQ96T49 567 aa25.16■■□□□ 1.62
HLA-C-202ENST00000376237 GINS2Q9Y248 185 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms