RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 COG2Q14746 738 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 ETNPPLQ8TBG4 499 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 FBXO25Q8TCJ0 367 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 JDP2Q8WYK2 163 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 THAP2Q9H0W7 228 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 ADAM7Q9H2U9 754 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 AZI2Q9H6S1 392 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 INTUQ9ULD6 942 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 COG5Q9UP83 839 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 SOX5P35711 763 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 KLRC3Q07444 240 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 SLC29A2Q14542 456 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 WLSQ5T9L3 541 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 RFFLQ8WZ73 363 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 RAB17Q9H0T7 212 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 METTL14Q9HCE5 456 aaKnown RBP15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 RGL1Q9NZL6 768 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 ODF2LQ9ULJ1 636 aa15.27■□□□□ 0.04
CLCNKA-202ENST00000375692 ZNF646O15015 1829 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 PLIN4Q96Q06 1357 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 BRCA1P38398 1863 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 CCT8L1PA6NM43 557 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 RPL13P26373 211 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 NMT1P30419 496 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 SLCO1A2P46721 670 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 EIF3BP55884 814 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 ARHGAP4P98171 946 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 XRCC4Q13426 336 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 ZDHHC24Q6UX98 284 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 SLFN12Q8IYM2 578 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 CYP2W1Q8TAV3 490 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 CTNNBL1Q8WYA6 563 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 C18orf8Q96DM3 657 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 BORCS6Q96GS4 357 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 KDM4CQ9H3R0 1056 aa15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 TTC7AQ9ULT0 858 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-202ENST00000375692 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM86B1E9PN63 330 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 MEIS2O14770 477 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 EGFRP00533 1210 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM86B2P0C5J1 330 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 KRT13P13646 458 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 CYP3A7P24462 503 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 RPA1P27694 616 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 SHMT1P34896 483 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 JAMLQ86YT9 394 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 CCDC197Q8NCU1 140 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 PIGOQ8TEQ8 1089 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 N4BP2L2Q92802 583 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 PABPC3Q9H361 631 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 SEMA4AQ9H3S1 761 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ZBTB39O15060 712 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 TMEM253P0C7T8 217 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ANXA13P27216 316 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 PPP1R7Q15435 360 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 DENND2CQ68D51 928 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 HIBCHQ6NVY1 386 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ARMC9Q7Z3E5 817 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 NEK9Q8TD19 979 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 ELAC2Q9BQ52 826 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
CLCNKA-202ENST00000375692 MYO3BQ8WXR4 1341 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TMEM110-MUSTN1A8MSY1 372 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 LMNB1P20700 586 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 ELF1P32519 619 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 NF2P35240 595 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 IFNAR2P48551 515 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 MARCKSL1P49006 195 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 CENPTQ96BT3 561 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 NCANO14594 1321 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TCP10L2B9ZVM9 353 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 SLC16A3O15427 465 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TBCAO75347 108 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms