RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 VTI1AQ96AJ9 217 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 FAM217BQ9NTX9 383 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 FAM153AQ9UHL3 310 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 NOL3O60936 208 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MT-ND3P03897 115 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 UCHL3P15374 230 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MUM1L1Q5H9M0 696 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 TMED8Q6PL24 325 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 TMEM270Q6UE05 265 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ARMC9Q7Z3E5 817 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ZC3H18Q86VM9 953 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MIPOL1Q8TD10 442 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 EPS8L3Q8TE67 593 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ELMO3Q96BJ8 720 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 NARFQ9UHQ1 456 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MCF2LO15068 1137 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MAP3K7O43318 606 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 EVX2Q03828 476 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MYO1EQ12965 1108 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 GPS1Q13098 491 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 TTC17Q96AE7 1141 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 C18orf8Q96DM3 657 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 IL17RAQ96F46 866 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CCDC17Q96LX7 622 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 C11orf70Q9BRQ4 267 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 WTIPA6NIX2 430 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 PHF2O75151 1096 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 PDHBP11177 359 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 SARSP49591 514 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ZBED8Q8IZ13 594 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ZNF668Q96K58 619 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 EVI5O60447 810 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 PPP1R37O75864 691 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 P4HA1P13674 534 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CA4P22748 312 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 GALCP54803 685 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CLEC4GQ6UXB4 293 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 C16orf86Q6ZW13 317 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 YIPF3Q9GZM5 350 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 SMYD3Q9H7B4 428 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MAPK13O15264 365 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 SLC16A3O15427 465 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 MTMR1Q13613 665 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 SMC1BQ8NDV3 1235 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 RFFLQ8WZ73 363 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 MTA3Q9BTC8 594 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 KDM3BQ7LBC6 1761 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 GOLGA8RI6L899 631 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 HMGB2P26583 209 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 GRM1Q13255 1194 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 CYFIP1Q7L576 1253 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 ZBTB8OSQ8IWT0 167 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 ANKRD36BP1Q96IX9 119 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 NOP53Q9NZM5 478 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 NT5DC1Q5TFE4 455 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 INTS5Q6P9B9 1019 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 HIPK4Q8NE63 616 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 PYROXD1Q8WU10 500 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 EHD4Q9H223 541 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 SLITRK6Q9H5Y7 841 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 TDRD3Q9H7E2 651 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 RSPH10B2B2RC85 870 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 GLI1P08151 1106 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 RSPH10BP0C881 870 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 SRGAP2CP0DJJ0 459 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 POLE2P56282 527 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 CHRNA3P32297 505 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 LMNB2Q03252 620 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 PACS2Q86VP3 889 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 KIAA0895Q8NCT3 520 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 FAF2Q96CS3 445 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 POLR3FQ9H1D9 316 aaPredicted RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 SCAF8Q9UPN6 1271 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 PODXLO00592 558 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 P3H1Q32P28 736 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 GNPTABQ3T906 1256 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 RCSD1Q6JBY9 416 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 TTI2Q6NXR4 508 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 HEXIM2Q96MH2 286 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 MTMR4Q9NYA4 1195 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 DAGLAQ9Y4D2 1042 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 A6NJR5 290 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 SART1O43290 800 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 NCF2P19878 526 aaPredicted RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 HSPA9P38646 679 aaKnown RBP7□□□□□ -1.29
SMC1A-202ENST00000375340 SEC23AQ15436 765 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 EPC2Q52LR7 807 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
SMC1A-202ENST00000375340 MYH6P13533 1939 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 DENND3A2RUS2 1198 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 PSAPP07602 524 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 FMO5P49326 533 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 DCLK2Q8N568 766 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMC1A-202ENST00000375340 TPCN2Q8NHX9 752 aa6.99□□□□□ -1.29
SMC1A-202ENST00000375340 GSDMBQ8TAX9 411 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms