RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KIAA1586Q9HCI6 787 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 HAUS2Q9NVX0 235 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 TLK1Q9UKI8 766 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 M0QZ92 97 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 AGTP01019 485 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-203ENST00000375274 CCND2P30279 289 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 SURF1Q15526 300 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 HAUS5O94927 633 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 EYA4O95677 639 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 P4HBP07237 508 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 ASNSP08243 561 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 CRKP46108 304 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 NAB2Q15742 525 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 EDRF1Q3B7T1 1238 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 GRAMD1BQ3KR37 738 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 TRAPPC11Q7Z392 1133 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 GRAMD1AQ96CP6 724 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 SNF8Q96H20 258 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 RAD17O75943 681 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 KRT38O76015 456 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 QARSP47897 775 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 TOB1P50616 345 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 JAK3P52333 1124 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 TFDP2Q14188 446 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF408Q9H9D4 720 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 TBC1D22BQ9NU19 505 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 G3BP2Q9UN86 482 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 TSPOAP1O95153 1857 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF335Q9H4Z2 1342 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 PFDN1O60925 122 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 SLC9A1P19634 815 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 ITKQ08881 620 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 KLHL38Q2WGJ6 581 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 HP1BP3Q5SSJ5 553 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCH1-203ENST00000375274 MCUQ8NE86 351 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 SLC35G2Q8TBE7 412 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 HDAC11Q96DB2 347 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 LXNQ9BS40 222 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 STK33Q9BYT3 514 aa12.32□□□□□ -0.44
PTCH1-203ENST00000375274 NPHP3-ACAD11A0A0J9YXS1 232 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 CDR2Q01850 454 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 GPS1Q13098 491 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 GRM1Q13255 1194 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 JADE1Q6IE81 842 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 RMDN3Q96TC7 470 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 FAM167BQ9BTA0 163 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 TCP11X1B4DZS4 312 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 SPECC1L-ADORA2AF8WAN1 911 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 STXBP3O00186 592 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 FAM107AO95990 144 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 KRT17Q04695 432 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
PTCH1-203ENST00000375274 CDO1Q16878 200 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 IZUMO3Q5VZ72 239 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 EFHD1Q9BUP0 239 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 TRAIPQ9BWF2 469 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 XPOTO43592 962 aaKnown RBP12.31□□□□□ -0.44
PTCH1-203ENST00000375274 TRPA1O75762 1119 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 PLEKP08567 350 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-203ENST00000375274 SRGAP2CP0DJJ0 459 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 CHN1P15882 459 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 PRPSAP1Q14558 356 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 THNSL1Q8IYQ7 743 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH1-203ENST00000375274 HSPH1Q92598 858 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 XPO6Q96QU8 1125 aaKnown RBP12.31□□□□□ -0.44
PTCH1-203ENST00000375274 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 LACRTQ9GZZ8 138 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 KLC2Q9H0B6 622 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
PTCH1-203ENST00000375274 LRRIQ3A6PVS8 624 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms