RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 NHEJ1Q9H9Q4 299 aaPredicted RBP13.11□□□□□ -0.31
SVEP1-201ENST00000374461 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
SVEP1-201ENST00000374461 CCDC151A5D8V7 595 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 SUPT20HL2P0C7V6 817 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 MYBL2P10244 700 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 MROH8Q9H579 483 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 RLFQ13129 1914 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 FTCDO95954 541 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ACTN1P12814 892 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 STAT5BP51692 787 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 KMT5AQ9NQR1 393 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 CYP26B1Q9NR63 512 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 KRT86O43790 486 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 PLS3P13797 630 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
SVEP1-201ENST00000374461 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
SVEP1-201ENST00000374461 ZSCAN5CA6NGD5 496 aaPredicted RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 PDXKO00764 312 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 GGCXP38435 758 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 SMTNP53814 917 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 POLR2FP61218 127 aaKnown RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 NEDD9Q14511 834 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 EPM2AIP1Q7L775 607 aaPredicted RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 TRAPPC12Q8WVT3 735 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 FRMD4BQ9Y2L6 1034 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 REXO2Q9Y3B8 237 aaKnown RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 STAM2O75886 525 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 NPTX2P47972 431 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 TAF1CQ15572 869 aaPredicted RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 BSNDQ8WZ55 320 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 TRIM31Q9BZY9 425 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
SVEP1-201ENST00000374461 SYNGAP1Q96PV0 1343 aa13.09□□□□□ -0.31
SVEP1-201ENST00000374461 MYO1CO00159 1063 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.31
SVEP1-201ENST00000374461 LRRC71Q8N4P6 559 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 SH2D3CQ8N5H7 860 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 METTL13Q8N6R0 699 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 FGD4Q96M96 766 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 KCND2Q9NZV8 630 aa13.08□□□□□ -0.31
SVEP1-201ENST00000374461 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.31
SVEP1-201ENST00000374461 PDE2AO00408 941 aaPredicted RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 ATP4AP20648 1035 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 MUTP22033 750 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 ZNF131P52739 623 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 EDRF1Q3B7T1 1238 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 MICALL1Q8N3F8 863 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 POLR3FQ9H1D9 316 aaPredicted RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 GSTTP1A0A1W2PQM5 241 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 HNRNPDLO14979 420 aaKnown RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
SVEP1-201ENST00000374461 SLC9A1P19634 815 aa13.08□□□□□ -0.32
SVEP1-201ENST00000374461 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms