RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
HDHD3-202ENST00000374180 FAM13BQ9NYF5 915 aa17.67■□□□□ 0.42
HDHD3-202ENST00000374180 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
HDHD3-202ENST00000374180 A0A087X0B3 334 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 NPHP3-ACAD11A0A0J9YXS1 232 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
HDHD3-202ENST00000374180 STAG3L1P0CL83 205 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 SARSP49591 514 aaKnown RBP17.66■□□□□ 0.42
HDHD3-202ENST00000374180 PEX3P56589 373 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 MAPK7Q13164 816 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 NAALADL2Q58DX5 795 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 SV2BQ7L1I2 683 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 C2orf40Q9H1Z8 148 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 C17orf75Q9HAS0 396 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
HDHD3-202ENST00000374180 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
HDHD3-202ENST00000374180 INSL6Q9Y581 213 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
HDHD3-202ENST00000374180 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 C9IYK1 514 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 MBTD1Q05BQ5 628 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 DMP1Q13316 513 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-202ENST00000374180 RESP18Q5W5W9 173 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 CDCA2Q69YH5 1023 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-202ENST00000374180 ADALQ6DHV7 355 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
HDHD3-202ENST00000374180 NPAS4Q8IUM7 802 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 YME1L1Q96TA2 773 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 NKX2-4Q9H2Z4 354 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 AGPAT5Q9NUQ2 364 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 KCNG1Q9UIX4 513 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 LRFN2Q9ULH4 789 aa17.65■□□□□ 0.42
HDHD3-202ENST00000374180 TTC3P53804 2025 aa17.64■□□□□ 0.42
HDHD3-202ENST00000374180 CA3P07451 260 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 HOXA11P31270 313 aaPredicted RBP17.64■□□□□ 0.41
HDHD3-202ENST00000374180 NPTX2P47972 431 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 EFNA5P52803 228 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 FAM189BP81408 668 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
HDHD3-202ENST00000374180 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 ODF2LQ9ULJ1 636 aa17.64■□□□□ 0.41
HDHD3-202ENST00000374180 A0A0U1RQF3 1178 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 TSPAN1O60635 241 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 PLS3P13797 630 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 AXLP30530 894 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 SMTNP53814 917 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 HTRA4P83105 476 aaPredicted RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 GIT2Q14161 759 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 MAPK6Q16659 721 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 ZNF697Q5TEC3 545 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 CRIPAKQ8N1N5 446 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 DHX58Q96C10 678 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 KMT5AQ9NQR1 393 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 PRMT7Q9NVM4 692 aaPredicted RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 CHMP5Q9NZZ3 219 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 LARSQ9P2J5 1176 aaKnown RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 TMEM265A0A087WTH1 108 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 LCHNA4D1U4 455 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 K7ERI5 159 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 POLR2DO15514 142 aaKnown RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 FAM13AO94988 1023 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 LIG1P18858 919 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 CMA1P23946 247 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 E2F4Q16254 413 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 AMHR2Q16671 573 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 ECHDC2Q86YB7 292 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 TRAIPQ9BWF2 469 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 FZD8Q9H461 694 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 CUEDC2Q9H467 287 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 ZNF576Q9H609 170 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
HDHD3-202ENST00000374180 TMEM161AQ9NX61 479 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 KCNH3Q9ULD8 1083 aa17.63■□□□□ 0.41
HDHD3-202ENST00000374180 TCHHQ07283 1943 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 ADGRA3Q8IWK6 1321 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 MYMKA6NI61 221 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 TBCAO75347 108 aaKnown RBP17.62■□□□□ 0.41
HDHD3-202ENST00000374180 DGKIO75912 1065 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 SKIP12755 728 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 ARF4P18085 180 aaPredicted RBP17.62■□□□□ 0.41
HDHD3-202ENST00000374180 FAM187BQ17R55 369 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 DYMQ7RTS9 669 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 MYCT1Q8N699 235 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 RNF169Q8NCN4 708 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 SPIRE2Q8WWL2 714 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 DDX12PQ92771 950 aa17.62■□□□□ 0.41
HDHD3-202ENST00000374180 CPB2Q96IY4 423 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms