RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
TSPAN6-201ENST00000373020 ZHX2Q9Y6X8 837 aa13.61□□□□□ -0.23
TSPAN6-201ENST00000373020 HMGB1P1B2RPK0 211 aaPredicted RBP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 NFIBO00712 420 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 RAD17O75943 681 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 ASNSP08243 561 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 KRT13P13646 458 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 PLS3P13797 630 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 INPP5BP32019 993 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 HSD17B3P37058 310 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 DNAJC21Q5F1R6 531 aaKnown RBP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 PCNX4Q63HM2 1172 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TMBIM4Q9HC24 238 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TAS2R14Q9NYV8 317 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 DDX39AO00148 427 aaKnown RBP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 FOXN3O00409 490 aaPredicted RBP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 DLG4P78352 724 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 PPP3CAQ08209 521 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 ACCSQ96QU6 501 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 AGPAT1Q99943 283 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TIPINQ9BVW5 301 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 RASSF4Q9H2L5 321 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 AMACRQ9UHK6 382 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 COG5Q9UP83 839 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
TSPAN6-201ENST00000373020 TISP43B9A030 160 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 NR1D1P20393 614 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ABCB4P21439 1286 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 VAMP7P51809 220 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 PTENP60484 403 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 MRPS9P82933 396 aaKnown RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 GTF2BQ00403 316 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 SPP2Q13103 211 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 PDCLQ13371 301 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 TNIP1Q15025 636 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 KCTD16Q68DU8 428 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 C11orf63Q6NUN7 778 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 RHOT2Q8IXI1 618 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 PFASO15067 1338 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 TTI1O43156 1089 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 LRRN2O75325 713 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 FGGP02679 453 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 QARSP47897 775 aaKnown RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 PLEKHO2Q8TD55 490 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 BCAS4Q8TDM0 211 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 SLC20A1Q8WUM9 679 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
TSPAN6-201ENST00000373020 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 CCT5P48643 541 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 NCKAP1LP55160 1127 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 MTMR3Q13615 1198 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 CLUL1Q15846 466 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 CEP85LQ5SZL2 805 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 TMC3Q7Z5M5 1100 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 C10orf67Q8IYJ2 551 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 XXYLT1Q8NBI6 393 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 SYTL5Q8TDW5 730 aaPredicted RBP13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 MAP3K20Q9NYL2 800 aaKnown RBP13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 HSPBP1Q9NZL4 362 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 PARP14Q460N5 1801 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 DAPK3O43293 454 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 MTA2O94776 668 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 VCAM1P19320 739 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 MAGEA9P43362 315 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 ZNF844Q08AG5 666 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 CETN1Q12798 172 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 SPDYCQ5MJ68 293 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 C4orf19Q8IY42 314 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 RDH13Q8NBN7 331 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 LPAR1Q92633 364 aa13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 NAP1L3Q99457 506 aaPredicted RBP13.58□□□□□ -0.24
TSPAN6-201ENST00000373020 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms