RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ZNF131P52739 623 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ADCY1Q08828 1119 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 TTC27Q6P3X3 843 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 TAOK1Q7L7X3 1001 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 RPGRQ92834 1020 aaKnown RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 CARD9Q9H257 536 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 MTRF1LQ9UGC7 380 aaKnown RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 CHORDC1Q9UHD1 332 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ACSL3O95573 720 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 GH1P01241 217 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 MYBL1P10243 752 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 HOXD13P35453 343 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 STAT1P42224 750 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 PTGIRP43119 386 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 PPATQ06203 517 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 TAF11Q15544 211 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 KRT35Q92764 455 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ARHGEF3Q9NR81 526 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 CTNNAL1Q9UBT7 734 aa17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-202ENST00000372857 ATP11AP98196 1134 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
PABPC4-202ENST00000372857 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 COG5Q9UP83 839 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
PABPC4-202ENST00000372857 KCNA1Q09470 495 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 SLMAPQ14BN4 828 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 THEMIS2Q5TEJ8 643 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 ZDHHC14Q8IZN3 488 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 PRELID2Q8N945 189 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 ARHGEF2Q92974 986 aaKnown RBP17.06■□□□□ 0.32
PABPC4-202ENST00000372857 SLC35C1Q96A29 364 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
PABPC4-202ENST00000372857 MED24O75448 989 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 FERP16591 822 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 VCAM1P19320 739 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 KCNJ1P48048 391 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 PSMC6P62333 389 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.329e-8■■■■□ 24.2
PABPC4-202ENST00000372857 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 CNKSR1Q969H4 720 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 IFT74Q96LB3 600 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 DNAJC17Q9NVM6 304 aaKnown RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 PHF2O75151 1096 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 BLMHQ13867 455 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 OSBPL1AQ9BXW6 950 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 STMN4Q9H169 189 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 CORO1CQ9ULV4 474 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 PFASO15067 1338 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 TCRBV7S2A1N4TA0A589 114 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 NR3C1P04150 777 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 LINGO3P0C6S8 592 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 SCNN1DP51172 638 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 GRAPQ13588 217 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 RIOX1Q9H6W3 641 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 NKX1-2Q9UD57 310 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-202ENST00000372857 ARL2BPQ9Y2Y0 163 aa17.05■□□□□ 0.32
PABPC4-202ENST00000372857 NCANO14594 1321 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 FAM196BA6NMK8 535 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 BAG3O95817 575 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 GTF2IP78347 998 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
PABPC4-202ENST00000372857 DRAP1Q14919 205 aaPredicted RBP17.04■□□□□ 0.32
PABPC4-202ENST00000372857 PPP2R5EQ16537 467 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 CRAMP1Q96RY5 1269 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
PABPC4-202ENST00000372857 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
PABPC4-202ENST00000372857 ETNK1Q9HBU6 452 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
PABPC4-202ENST00000372857 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
PABPC4-202ENST00000372857 SOX5P35711 763 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms