RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 NELFCDQ8IXH7 590 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 SYCP3Q8IZU3 236 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 GLIS3Q8NEA6 775 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 PPP1R13LQ8WUF5 828 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 KCNN1Q92952 543 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 SCLT1Q96NL6 688 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 TMEM106CQ9BVX2 250 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-202ENST00000372422 ARHGAP28Q9P2N2 729 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 NOD1Q9Y239 953 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 PHKA2P46019 1235 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 GJA8P48165 433 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 ZC2HC1CQ53FD0 456 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-202ENST00000372422 CENPPQ6IPU0 288 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-202ENST00000372422 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 HS2ST1Q7LGA3 356 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 ZNF410Q86VK4 478 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 GOLGA5Q8TBA6 731 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 KIFC3Q9BVG8 833 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 STRA6Q9BX79 667 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 NFKBIZQ9BYH8 718 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
YIPF3-202ENST00000372422 GRIN2DO15399 1336 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 K7ERI5 159 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 CALUO43852 315 aaPredicted RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 STX17P56962 302 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 HIC1Q14526 733 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 IQCB1Q15051 598 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 PTGISQ16647 500 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 SPATA1Q5VX52 437 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 LUZP1Q86V48 1076 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 DHX40Q8IX18 779 aaKnown RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 NLRP7Q8WX94 980 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
YIPF3-202ENST00000372422 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
YIPF3-202ENST00000372422 ADGRA3Q8IWK6 1321 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 M0QZ92 97 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 ARVCFO00192 962 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 PDXKO00764 312 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 VTNP04004 478 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
YIPF3-202ENST00000372422 MAPK6Q16659 721 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 SERINC5Q86VE9 423 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 MAP4K3Q8IVH8 894 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 DNAJB3Q8WWF6 145 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 MCOLN1Q9GZU1 580 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 KCTD10Q9H3F6 313 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
YIPF3-202ENST00000372422 NFE2L3Q9Y4A8 694 aa16.49■□□□□ 0.23
YIPF3-202ENST00000372422 GPC3P51654 580 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 NLRP11P59045 1033 aaKnown RBP16.48■□□□□ 0.23
YIPF3-202ENST00000372422 PTENP60484 403 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 EDRF1Q3B7T1 1238 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 ANKRD40Q6AI12 368 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 NOC3LQ8WTT2 800 aaKnown RBP16.48■□□□□ 0.23
YIPF3-202ENST00000372422 BICD1Q96G01 975 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-202ENST00000372422 INO80BQ9C086 356 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-202ENST00000372422 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 ZKSCAN5Q9Y2L8 839 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
YIPF3-202ENST00000372422 A0A087WZ62 844 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 TRIM49BA6NDI0 452 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 RPL13P26373 211 aaKnown RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 KCNA1Q09470 495 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 PTK7Q13308 1070 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 TTI2Q6NXR4 508 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 RPAINQ86UA6 219 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 FDXACB1Q9BRP7 624 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 SENP6Q9GZR1 1112 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 HOXD13P35453 343 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 PMS1P54277 932 aaKnown RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 PCBP1Q15365 356 aaKnown RBP eCLIP16.47■□□□□ 0.236e-7■■■■■ 37.6
YIPF3-202ENST00000372422 FAM114A1Q8IWE2 563 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
YIPF3-202ENST00000372422 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 GINS2Q9Y248 185 aa16.47■□□□□ 0.23
YIPF3-202ENST00000372422 CENPFP49454 3210 aa16.46■□□□□ 0.23
YIPF3-202ENST00000372422 EVPLQ92817 2033 aa16.46■□□□□ 0.23
YIPF3-202ENST00000372422 HNRNPDLO14979 420 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms