RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NLRP4Q96MN2 994 aa17.45■□□□□ 0.38
TMEM53-204ENST00000372243 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
TMEM53-204ENST00000372243 TSPY26PQ9H489 355 aa17.45■□□□□ 0.38
TMEM53-204ENST00000372243 IFT122Q9HBG6 1241 aa17.45■□□□□ 0.38
TMEM53-204ENST00000372243 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
TMEM53-204ENST00000372243 A0A087WZ62 844 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 PSMA7O14818 248 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 GPR32O75388 356 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 CD4P01730 458 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 PHKA2P46019 1235 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 ZC2HC1CQ53FD0 456 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-204ENST00000372243 L1TD1Q5T7N2 865 aaKnown RBP17.44■□□□□ 0.38
TMEM53-204ENST00000372243 FOXR2Q6PJQ5 311 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 TOX2Q96NM4 488 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 BPIFA3Q9BQP9 254 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-204ENST00000372243 KIFC3Q9BVG8 833 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 DNAJC25Q9H1X3 360 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 TMEM206Q9H813 350 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 MAPK8IP1Q9UQF2 711 aa17.44■□□□□ 0.38
TMEM53-204ENST00000372243 K7ERI5 159 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 TLR3O15455 904 aaKnown RBP17.43■□□□□ 0.38
TMEM53-204ENST00000372243 RBL2Q08999 1139 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 KNOP1Q1ED39 458 aaKnown RBP17.43■□□□□ 0.38
TMEM53-204ENST00000372243 TRIM71Q2Q1W2 868 aaKnown RBP17.43■□□□□ 0.38
TMEM53-204ENST00000372243 C11orf57Q6ZUT1 292 aaPredicted RBP17.43■□□□□ 0.38
TMEM53-204ENST00000372243 SRGAP1Q7Z6B7 1085 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 MAP4K3Q8IVH8 894 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 CCDC113Q9H0I3 377 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 TBX20Q9UMR3 447 aa17.43■□□□□ 0.38
TMEM53-204ENST00000372243 M0QZ92 97 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 PRPF6O94906 941 aaKnown RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 HOXD13P35453 343 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 CRYBB1P53674 252 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 MRPS6P82932 125 aaKnown RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 PAK1Q13153 545 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 CENPPQ6IPU0 288 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 DHX38Q92620 1227 aaKnown RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 WNT8BQ93098 351 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 CELF4Q9BZC1 486 aaKnown RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 INO80BQ9C086 356 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-204ENST00000372243 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 EXOC7Q9UPT5 735 aa17.42■□□□□ 0.38
TMEM53-204ENST00000372243 PDXKO00764 312 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 CCNE1P24864 410 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 ZNF165P49910 485 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
TMEM53-204ENST00000372243 SNRPFP62306 86 aaKnown RBP17.41■□□□□ 0.38
TMEM53-204ENST00000372243 TMEM62Q0P6H9 643 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 STRN3Q13033 797 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 KIZQ2M2Z5 673 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 FAM26DQ5JW98 314 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 TAS1R3Q7RTX0 852 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 P2RX5Q93086 422 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 PRIMPOLQ96LW4 560 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 SCLT1Q96NL6 688 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 KCTD10Q9H3F6 313 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 FZD8Q9H461 694 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 TRPV2Q9Y5S1 764 aa17.41■□□□□ 0.38
TMEM53-204ENST00000372243 BICDL2A1A5D9 508 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 PIGRP01833 764 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 MBTD1Q05BQ5 628 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 LRRC63Q05C16 580 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 MGAT3Q09327 533 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 KCNA1Q09470 495 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 MAPK6Q16659 721 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 CGNQ9P2M7 1197 aaKnown RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 TRAF3IP3Q9Y228 551 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 INO80B-WBP1J3KQ70 363 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 DARSP14868 501 aaKnown RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 EIF4BP23588 611 aaKnown RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 THPOP40225 353 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 ZCWPW2Q504Y3 356 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 NELFCDQ8IXH7 590 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 ENOX1Q8TC92 643 aaKnown RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 FAM200AQ8TCP9 573 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 ZNF668Q96K58 619 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 SEMA6BQ9H3T3 888 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 MINDY3Q9H8M7 445 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms