RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 COL1A2P08123 1366 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 INSRRP14616 1297 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 XXYLT1Q8NBI6 393 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 BAG1Q99933 345 aaPredicted RBP28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 CFHR5Q9BXR6 569 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 ARHGAP39Q9C0H5 1083 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 CAPN11Q9UMQ6 739 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 SIK3Q9Y2K2 1263 aa28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 LUC7L2Q9Y383 392 aaKnown RBP28.77■■■□□ 2.2
ATPAF1-202ENST00000371937 MAGEB2O15479 319 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 STX10O60499 249 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 AFPP02771 609 aaKnown RBP28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 TLK2Q86UE8 772 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 CBWD1Q9BRT8 395 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 RRAGDQ9NQL2 400 aaPredicted RBP28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 HSPBP1Q9NZL4 362 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 K7ERI5 159 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 MAPK13O15264 365 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 SP3Q02447 781 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 DCAF17Q5H9S7 520 aaPredicted RBP28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 NAA15Q9BXJ9 866 aaKnown RBP28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 TMEM134Q9H6X4 195 aa28.76■■■□□ 2.19
ATPAF1-202ENST00000371937 TTC26A0AVF1 554 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 TISP43B9A030 160 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 HNRNPDLO14979 420 aaKnown RBP28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 TBC1D8O95759 1140 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 MAP2K2P36507 400 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 KCNJ6P48051 423 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 EFNA5P52803 228 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 DRP2Q13474 957 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 CAPSQ13938 189 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 TCERG1LQ5VWI1 586 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 MFSD14CQ5VZR4 134 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 TRAPPC12Q8WVT3 735 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 SLC35C1Q96A29 364 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 BICD1Q96G01 975 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 PCIF1Q9H4Z3 704 aa28.75■■■□□ 2.19
ATPAF1-202ENST00000371937 ADCY3O60266 1144 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 KRT9P35527 623 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 FLT3LGP49771 235 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 LAMTOR4Q0VGL1 99 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 MKRN4PQ13434 485 aaPredicted RBP28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 EFCAB12Q6NXP0 572 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 TAS1R3Q7RTX0 852 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 LRRC71Q8N4P6 559 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 TTYH3Q9C0H2 523 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 AP5M1Q9H0R1 490 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 MMRN2Q9H8L6 949 aa28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 SUCLA2Q9P2R7 463 aaPredicted RBP28.74■■■□□ 2.19
ATPAF1-202ENST00000371937 A0A1W2PQJ5 194 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 ANKRD63C9JTQ0 380 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 ASAP2O43150 1006 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 C22orf31O95567 290 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 KLK7P49862 253 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 CPT1AP50416 773 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 INTS8Q75QN2 995 aaKnown RBP28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 TMEM139Q8IV31 216 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 ZNF397Q8NF99 534 aaPredicted RBP28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 ABHD10Q9NUJ1 306 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 PHLPP2Q6ZVD8 1323 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 ARHGAP6O43182 974 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 KRT13P13646 458 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 AKR1A1P14550 325 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 GARTP22102 1010 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 IGBP1P78318 339 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 NOLC1Q14978 699 aaKnown RBP eCLIP28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 METTL13Q8N6R0 699 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 GABRQQ9UN88 632 aa28.73■■■□□ 2.19
ATPAF1-202ENST00000371937 KLRC1P26715 233 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 ADSSP30520 456 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 TFDP1Q14186 410 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 TSR1Q2NL82 804 aaKnown RBP28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 CCDC155Q8N6L0 562 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 NEK11Q8NG66 645 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 OR8K1Q8NGG5 319 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 C2orf40Q9H1Z8 148 aa28.72■■■□□ 2.19
ATPAF1-202ENST00000371937 RNF225M0QZC1 329 aaPredicted RBP28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 LIG4P49917 911 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 ZBED6P86452 979 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 KCNMA1Q12791 1236 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 BFSP1Q12934 665 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 ZBTB8OSQ8IWT0 167 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 RDH13Q8NBN7 331 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 POMGNT1Q8WZA1 660 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 EDEM3Q9BZQ6 932 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 FAM207AQ9NSI2 230 aaPredicted RBP28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 PIGRP01833 764 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 TMOD1P28289 359 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 PPFIA1Q13136 1202 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 CDCA2Q69YH5 1023 aaPredicted RBP28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 SLC39A4Q6P5W5 647 aa28.71■■■□□ 2.19
ATPAF1-202ENST00000371937 GTPBP10A4D1E9 387 aaKnown RBP28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 CLCN1P35523 988 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 PRKCZQ05513 592 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 HSP90AA2PQ14568 343 aaPredicted RBP28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 RHPN2Q8IUC4 686 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 RNF149Q8NC42 400 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 TRIB2Q92519 343 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 DNAJC7Q99615 494 aa28.7■■■□□ 2.18
ATPAF1-202ENST00000371937 SPTLC3Q9NUV7 552 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms