RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 MTMR9Q96QG7 549 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 PAIP2Q9BPZ3 127 aaKnown RBP12.5□□□□□ -0.41
CTCFL-202ENST00000371196 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 CETN3O15182 167 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 EYA4O95677 639 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 CYP2D6P10635 497 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■□□□ 13.1
CTCFL-202ENST00000371196 TRIM74Q86UV6 250 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 TRIM73Q86UV7 250 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
CTCFL-202ENST00000371196 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 NMRK1Q9NWW6 199 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 PCYOX1Q9UHG3 505 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ACSL3O95573 720 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 VCAM1P19320 739 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 RASA1P20936 1047 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 EPHB2P29323 1055 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-202ENST00000371196 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ARHGEF18Q6ZSZ5 1173 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ALG3Q92685 438 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ART4Q93070 314 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 DENND2DQ9H6A0 471 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-202ENST00000371196 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
CTCFL-202ENST00000371196 ABCB4P21439 1286 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 GNA11P29992 359 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 TFAP4Q01664 338 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 TRMT10CQ7L0Y3 403 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 PRELID2Q8N945 189 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 SLC7A6OSQ96CW6 309 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 DCP1AQ9NPI6 582 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 STOML1Q9UBI4 398 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 CHKBQ9Y259 395 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 LMNAP02545 664 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 VHLP40337 213 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 YARSP54577 528 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 SESN3P58005 492 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 RCN2Q14257 317 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 TTC27Q6P3X3 843 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 CCDC137Q6PK04 289 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 ATL2Q8NHH9 583 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 LRRC8CQ8TDW0 803 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 DTNBP1Q96EV8 351 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 CDC42EP4Q9H3Q1 356 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 BMP2KQ9NSY1 1161 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 PYGBP11216 843 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 TAC1P20366 129 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 NR2F2P24468 414 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 RASSF2P50749 326 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 SCFD1Q8WVM8 642 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 CTNNBL1Q8WYA6 563 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
CTCFL-202ENST00000371196 BIN2Q9UBW5 565 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-202ENST00000371196 NCANO14594 1321 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 LRP5O75197 1615 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 MAPK13O15264 365 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 TMEM253P0C7T8 217 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 SKIP12755 728 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 JAM2P57087 298 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 USP4Q13107 963 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-202ENST00000371196 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 SDCCAG8Q86SQ7 713 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-202ENST00000371196 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-202ENST00000371196 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
CTCFL-202ENST00000371196 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 IGSF9BQ9UPX0 1349 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 SIGLEC16A6NMB1 481 aa12.48□□□□□ -0.41
CTCFL-202ENST00000371196 SMAPO00193 183 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms