RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 RGL1Q9NZL6 768 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 A0A1W2PQJ5 194 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 SH3BGRP55822 239 aaPredicted RBP12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 VSNL1P62760 191 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 Q9H521 79 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 MARK3P27448 753 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 CATSPER4Q7RTX7 472 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 NOC2LQ9Y3T9 749 aaKnown RBP12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 ITSN1Q15811 1721 aa12.68□□□□□ -0.38
DEPDC1-201ENST00000370966 BAG2O95816 211 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 GYPCP04921 128 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SAT1P21673 171 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 GYS2P54840 703 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 DBN1Q16643 649 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 RHOT1Q8IXI2 618 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 HPS3Q969F9 1004 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 TLK1Q9UKI8 766 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 MMEP08473 750 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 KRT7P08729 469 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 UCHL3P15374 230 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF394Q53GI3 561 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SPOUT1Q5T280 376 aaKnown RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 HIBCHQ6NVY1 386 aaPredicted RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 RAPH1Q70E73 1250 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 KLC2Q9H0B6 622 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ESYT3A0FGR9 886 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 RPA1P27694 616 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 PMS2P54278 862 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ABI1Q8IZP0 508 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SLC12A6Q9UHW9 1150 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 FGFR2P21802 821 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 MRPL4Q9BYD3 311 aaKnown RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 IP6K2Q9UHH9 426 aa12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
DEPDC1-201ENST00000370966 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 COPB2P35606 906 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ARL13BQ3SXY8 428 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 GBP5Q96PP8 586 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 PSMD14O00487 310 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 MAPK13O15264 365 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 CTIFO43310 598 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 DGAT1O75907 488 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 GNA15P30679 374 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF746Q6NUN9 644 aaPredicted RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ANKRD7Q92527 254 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 HEMGNQ9BXL5 484 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 VCX3AQ9NNX9 186 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 APEX2Q9UBZ4 518 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 FOXP2O15409 715 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 EFNA5P52803 228 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 PPP2R2AP63151 447 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 GRIN1Q05586 938 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ATG16L1Q676U5 607 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 SAAL1Q96ER3 474 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ATP6V1G3Q96LB4 118 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 CPSF2Q9P2I0 782 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 ATP8B3O60423 1300 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 UBE4BO95155 1302 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 RTN2O75298 545 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 MAGEA9P43362 315 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 GSPT2Q8IYD1 628 aaKnown RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 MYCBPQ99417 103 aaPredicted RBP12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 POLR3FQ9H1D9 316 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms