RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 FUT8Q9BYC5 575 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ARHGAP39Q9C0H5 1083 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 GLT8D2Q9H1C3 349 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ARFGAP3Q9NP61 516 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZC3H7BQ9UGR2 993 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF510Q9Y2H8 683 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TMED5Q9Y3A6 229 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 MROH7Q68CQ1 1323 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 SRRM3A6NNA2 597 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 GOLGA8AA7E2F4 631 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 BTBD19C9JJ37 291 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 G3V3G9 751 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 H0YC42 278 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 IRS4O14654 1257 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PDE8AO60658 829 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 STAM2O75886 525 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LDHBP07195 334 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 RPSAP08865 295 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 DESP17661 470 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 RAC1P63000 192 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 GBE1Q04446 702 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PPP2R2DQ66LE6 453 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LDHAL6AQ6ZMR3 332 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 B4GALNT4Q76KP1 1039 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC24Q8N4L8 307 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP38Q8NB14 1042 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 SPC24Q8NBT2 197 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 ARRDC4Q8NCT1 418 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 SPDYE1Q8NFV5 336 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 TRIM58Q8NG06 486 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 MTMR8Q96EF0 704 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 TEPSINQ96N21 525 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 FUCA2Q9BTY2 467 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 MRPL9Q9BYD2 267 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 DDX18Q9NVP1 670 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 EXOC6BQ9Y2D4 811 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PCDHGC5Q9Y5F6 944 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CEP350Q5VT06 3117 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 TRIM75PA6NK02 468 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L15C9J2P7 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L13C9JLJ4 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L12C9JPN9 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L11C9JVI0 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L21D6R901 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L18D6R9N7 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L22D6RA61 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L17D6RBQ6 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L19D6RCP7 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L20D6RJB6 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 EBAG9O00559 213 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LARGE1O95461 756 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 MCM3P25205 808 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PHEXP78562 749 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L24Q0WX57 530 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PIN1Q13526 163 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CUL3Q13618 768 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CRTC1Q6UUV9 634 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LBX2Q6XYB7 198 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LHFPL2Q6ZUX7 228 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC84Q86UT8 332 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 FAM9CQ8IZT9 166 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 C17orf53Q8N3J3 647 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF540Q8NDQ6 660 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LMBR1Q8WVP7 490 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 CUL5Q93034 780 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 SLC35B4Q969S0 331 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 C16orf45Q96MC5 204 aaPredicted RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 GORASP1Q9BQQ3 440 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 UPF3BQ9BZI7 483 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 BRD8Q9H0E9 1235 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 LUC7L2Q9Y383 392 aaKnown RBP5.51□□□□□ -1.53
UBE3D-202ENST00000369746 NDUFB9Q9Y6M9 179 aa5.51□□□□□ -1.53
UBE3D-202ENST00000369746 PTPRFP10586 1907 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 FAM170AA1A519 330 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 F5H423 210 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 K7ENM7 598 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TLL1O43897 1013 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NMT2O60551 498 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 VIMP08670 466 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CTSHP09668 335 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 MX1P20591 662 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 EIF4BP23588 611 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 MAPK4P31152 587 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CHKAP35790 457 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 HTR3AP46098 478 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NFKB2Q00653 900 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NHLH1Q02575 133 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 GALEQ14376 348 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ARHGAP29Q52LW3 1261 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 OLFML2BQ68BL8 750 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 SLC6A19Q695T7 634 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ZSCAN25Q6NSZ9 544 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 PSRC1Q6PGN9 363 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms