RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 TMEM221A6NGB7 291 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 C2orf71A6NGG8 1288 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 M0R296 226 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 WNT7AO00755 349 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 EPB41L2O43491 1005 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 CLASP2O75122 1294 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 EOMESO95936 686 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 SRGAP2CP0DJJ0 459 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 PPM1AP35813 382 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 QARSP47897 775 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 DNM2P50570 870 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 KRT17Q04695 432 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 CBX2Q14781 532 aaPredicted RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 PDE12Q6L8Q7 609 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 C12orf76Q8N812 135 aaPredicted RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 LXNQ9BS40 222 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 IFT122Q9HBG6 1241 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 TBC1D13Q9NVG8 400 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 ORC3Q9UBD5 711 aaPredicted RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 ARIH1Q9Y4X5 557 aaPredicted RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 COL4A3BPQ9Y5P4 624 aa15.15■□□□□ 0.02
PMF1-202ENST00000368277 MTCL1Q9Y4B5 1905 aaKnown RBP15.15■□□□□ 0.02
PMF1-202ENST00000368277 A0A087WWV3 80 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 CDKL5O76039 1030 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
PMF1-202ENST00000368277 SLC11A1P49279 550 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
PMF1-202ENST00000368277 ZXDAP98168 799 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 ZNF410Q86VK4 478 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 ZNF280BQ86YH2 543 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 TMEM169Q96HH4 297 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 VN1R3Q9BXE9 311 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 MRPL9Q9BYD2 267 aaKnown RBP15.14■□□□□ 0.01
PMF1-202ENST00000368277 ZBP1Q9H171 429 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
PMF1-202ENST00000368277 AGPAT5Q9NUQ2 364 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 DOCK6Q96HP0 2047 aa15.14■□□□□ 0.01
PMF1-202ENST00000368277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 MARCH6O60337 910 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 JAK2O60674 1132 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 OFD1O75665 1012 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 CXCL14O95715 111 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 SSBP05455 408 aaKnown RBP eCLIP15.13■□□□□ 0.014e-6■□□□□ 10.9
PMF1-202ENST00000368277 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 SRGAP2BP0DMP2 458 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 EPCAMP16422 314 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 NHLH1Q02575 133 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 SPIRE1Q08AE8 756 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 EMC2Q15006 297 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 NOMO2Q5JPE7 1267 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 UBXN11Q5T124 520 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 IER5LQ5T953 404 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 PPP4R3AQ6IN85 833 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 TMEM184AQ6ZMB5 413 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 AGMOQ6ZNB7 445 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 FAM43BQ6ZT52 329 aaPredicted RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 TRIM67Q6ZTA4 783 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 ZNF710Q8N1W2 664 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 MRPL43Q8N983 215 aaKnown RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 FAM20AQ96MK3 541 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 POMKQ9H5K3 350 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
PMF1-202ENST00000368277 CHST12Q9NRB3 414 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
PMF1-202ENST00000368277 DDHD2O94830 711 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 GALTP07902 379 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 GCFC2P16383 781 aaKnown RBP15.12■□□□□ 0.01
PMF1-202ENST00000368277 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
PMF1-202ENST00000368277 KRT2P35908 639 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 ALDH7A1P49419 539 aaKnown RBP15.12■□□□□ 0.01
PMF1-202ENST00000368277 RNASELQ05823 741 aaKnown RBP15.12■□□□□ 0.01
PMF1-202ENST00000368277 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 EPHA7Q15375 998 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 ME3Q16798 604 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 XKR9Q5GH70 373 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 GLB1LQ6UWU2 654 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 PRSS33Q8NF86 280 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 PSPC1Q8WXF1 523 aaKnown RBP15.12■□□□□ 0.01
PMF1-202ENST00000368277 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 CASP10Q92851 521 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 PBXIP1Q96AQ6 731 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 IGSF21Q96ID5 467 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 XPNPEP1Q9NQW7 623 aa15.12■□□□□ 0.01
PMF1-202ENST00000368277 C2CD4DB7Z1M9 353 aa15.11■□□□□ 0.01
PMF1-202ENST00000368277 PDGFBP01127 241 aaPredicted RBP15.11■□□□□ 0.01
PMF1-202ENST00000368277 POMCP01189 267 aa15.11■□□□□ 0.01
PMF1-202ENST00000368277 XBP1P17861 261 aa15.11■□□□□ 0.01
PMF1-202ENST00000368277 VCPP55072 806 aaKnown RBP15.11■□□□□ 0.01
PMF1-202ENST00000368277 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
PMF1-202ENST00000368277 TPH2Q8IWU9 490 aa15.11■□□□□ 0.01
PMF1-202ENST00000368277 RNF149Q8NC42 400 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms