RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CHMP2AO43633 222 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 DTNBO60941 627 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 RPS6KA5O75582 802 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 CDKL5O76039 1030 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 VTNP04004 478 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 RB1P06400 928 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 CTNNB1P35222 781 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 CLCN3P51790 818 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 JAK3P52333 1124 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 CRYBB1P53674 252 aaPredicted RBP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 AK2P54819 239 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 PRKCEQ02156 737 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 NFX1Q12986 1120 aaKnown RBP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 BTG3Q14201 252 aaPredicted RBP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 NONOQ15233 471 aaKnown RBP eCLIP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 INF2Q27J81 1249 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 LINC01559Q495D7 138 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 TIGD5Q53EQ6 642 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 RDM1Q8NG50 284 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 EPS8L1Q8TE68 723 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 OSMRQ99650 979 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
H3F3A-203ENST00000366815 GJB4Q9NTQ9 266 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 ST3GAL5Q9UNP4 418 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.41
H3F3A-203ENST00000366815 PLXNA4Q9HCM2 1894 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 GRM6O15303 877 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 SLC37A4O43826 429 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 STBD1O95210 358 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 STAG3L1P0CL83 205 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 SARSP49591 514 aaKnown RBP12.51□□□□□ -0.41
H3F3A-203ENST00000366815 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
H3F3A-203ENST00000366815 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 FAM228AQ86W67 206 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 BAP1Q92560 729 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 C11orf84Q9BUA3 381 aaPredicted RBP12.51□□□□□ -0.41
H3F3A-203ENST00000366815 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 RGS18Q9NS28 235 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 NRBP2Q9NSY0 501 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
H3F3A-203ENST00000366815 WASF2Q9Y6W5 498 aa12.51□□□□□ -0.41
H3F3A-203ENST00000366815 C9IYK1 514 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 GPR182O15218 404 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 LARGE1O95461 756 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 GATMP50440 423 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 NLRP11P59045 1033 aaKnown RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 DSC3Q14574 896 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ME3Q16798 604 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 TCEAL5Q5H9L2 206 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 P2RX5Q93086 422 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ADAM2Q99965 735 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 NSUN3Q9H649 340 aaKnown RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 KCNMB3Q9NPA1 279 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
H3F3A-203ENST00000366815 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
H3F3A-203ENST00000366815 CCDC194A0A1B0GVG4 234 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 SIAH2O43255 324 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 XBP1P17861 261 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 SH3BP2P78314 561 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 FAM189BP81408 668 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 CAMK1Q14012 370 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 LEXMQ3ZCV2 418 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
H3F3A-203ENST00000366815 EARS2Q5JPH6 523 aaKnown RBP12.49□□□□□ -0.41
H3F3A-203ENST00000366815 PPP4R3AQ6IN85 833 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 SLC24A5Q71RS6 500 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 VAV3Q9UKW4 847 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 AKT3Q9Y243 479 aa12.49□□□□□ -0.41
H3F3A-203ENST00000366815 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
H3F3A-203ENST00000366815 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
H3F3A-203ENST00000366815 DENND3A2RUS2 1198 aa12.48□□□□□ -0.41
H3F3A-203ENST00000366815 EML1O00423 815 aa12.48□□□□□ -0.41
H3F3A-203ENST00000366815 MMP1P03956 469 aa12.48□□□□□ -0.41
H3F3A-203ENST00000366815 GCFC2P16383 781 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms