RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 SEC24DO94855 1032 aaPredicted RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 RHCEP18577 417 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 WT1P19544 449 aaPredicted RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 MCM4P33991 863 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 RNASE9P60153 205 aaKnown RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 KCNAB2Q13303 367 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 TCIRG1Q13488 830 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 MOGSQ13724 837 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 UBE3CQ15386 1083 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 KRTAP24-1Q3LI83 254 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 SUPT20HL1Q3ZLR7 823 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 TMEM119Q4V9L6 283 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 TSTD2Q5T7W7 516 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 E4F1Q66K89 784 aaPredicted RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 GRAMD4Q6IC98 578 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 ARMC6Q6NXE6 501 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 KLHDC10Q6PID8 442 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 ZNF782Q6ZMW2 699 aaPredicted RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 C9orf47Q6ZRZ4 202 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 AMIGO2Q86SJ2 522 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 ARHGEF39Q8N4T4 335 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 TAB3Q8N5C8 712 aaPredicted RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 HAUS7Q99871 368 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 ADAM2Q99965 735 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 INCENPQ9NQS7 918 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 TRMT13Q9NUP7 481 aaKnown RBP0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 MAP3K2Q9Y2U5 619 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 VWA7Q9Y334 891 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 AFG3L2Q9Y4W6 797 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 ENTPD2Q9Y5L3 495 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 SMAD5-AS1Q9Y6J3 95 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 COL2A1P02458 1487 aaPredicted RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 ROBO2Q9HCK4 1378 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 DIRC3C9JPN6 131 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 MEFVO15553 781 aaPredicted RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CDKL5O76039 1030 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 KCNH1O95259 989 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 PRG2P13727 222 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CDKN2AP42771 156 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CRKP46108 304 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 SOX10P56693 466 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CLCQ05315 142 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 ASIC2Q16515 512 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 MRGPRG-AS1Q2M3A8 158 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 GAGE13Q4V321 117 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 MEI1Q5TIA1 1274 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CYB5RLQ6IPT4 315 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 MRPL10Q7Z7H8 261 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 NANOGP1Q8N7R0 232 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 GLB1L3Q8NCI6 653 aaPredicted RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 REPS2Q8NFH8 660 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 SLC7A14Q8TBB6 771 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 DDX17Q92841 729 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 GFM2Q969S9 779 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 WNK4Q96J92 1243 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 FGD4Q96M96 766 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 TMEM74Q96NL1 305 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 SH2D3AQ9BRG2 576 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 QTRT1Q9BXR0 403 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 NCOA5Q9HCD5 579 aaKnown RBP0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 GALNT8Q9NY28 637 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 MCM8Q9UJA3 840 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 HDAC5Q9UQL6 1122 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 AKT3Q9Y243 479 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 CHST2Q9Y4C5 530 aa0.87□□□□□ -2.27
RNU6-478P-201ENST00000363904 A0A087WYN8 130 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 IGKV3D-20A0A0C4DH25 116 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 LACTBL1A8MY62 500 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 KCNU1A8MYU2 1149 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 MINDY4BA8MYZ0 360 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 ACOT7O00154 380 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 PPP6CO00743 305 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 ITGAVP06756 1048 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 PTGS1P23219 599 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 PWP1Q13610 501 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 SPIDRQ14159 915 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 STILQ15468 1287 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 NAALADL2Q58DX5 795 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 METTL24Q5JXM2 366 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 SUMO4Q6EEV6 95 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 LVRNQ6Q4G3 990 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 CRACR2BQ8N4Y2 399 aaPredicted RBP0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 NRACQ8N912 160 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 RCBTB1Q8NDN9 531 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 NPLOC4Q8TAT6 608 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 NKD2Q969F2 451 aaPredicted RBP0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 RCC1LQ96I51 464 aaKnown RBP0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 AIFM2Q9BRQ8 373 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 JAM3Q9BX67 310 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 BTBD2Q9BX70 525 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 LRRC3Q9BY71 257 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 SMURF1Q9HCE7 757 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 TBCCD1Q9NVR7 557 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 DMTF1Q9Y222 760 aa0.86□□□□□ -2.27
RNU6-478P-201ENST00000363904 TMEM88BA6NKF7 163 aa0.85□□□□□ -2.27
RNU6-478P-201ENST00000363904 CAPNS1P04632 268 aa0.85□□□□□ -2.27
RNU6-478P-201ENST00000363904 CYP2D6P10635 497 aa0.85□□□□□ -2.27
RNU6-478P-201ENST00000363904 TCEA1P23193 301 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms