RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZBTB10Q96DT7 871 aa22.72■■□□□ 1.23
SHISA4-201ENST00000362011 NTPCRQ9BSD7 190 aaKnown RBP22.72■■□□□ 1.23
SHISA4-201ENST00000362011 GTF2IRD1Q9UHL9 959 aa22.72■■□□□ 1.23
SHISA4-201ENST00000362011 RWDD2AQ9UIY3 292 aa22.72■■□□□ 1.23
SHISA4-201ENST00000362011 BICDL2A1A5D9 508 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 MBLAC1A4D2B0 266 aaPredicted RBP22.71■■□□□ 1.23
SHISA4-201ENST00000362011 IKBKBO14920 756 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 PPP1R37O75864 691 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 PRPF6O94906 941 aaKnown RBP22.71■■□□□ 1.23
SHISA4-201ENST00000362011 STX17P56962 302 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 MYL5Q02045 173 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 CAPSQ13938 189 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 BMT2Q1RMZ1 405 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 FAM47CQ5HY64 1035 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 HAUS6Q7Z4H7 955 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 LUZP1Q86V48 1076 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 SESTD1Q86VW0 696 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 DEPTORQ8TB45 409 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 ENOX1Q8TC92 643 aaKnown RBP22.71■■□□□ 1.23
SHISA4-201ENST00000362011 PRPF31Q8WWY3 499 aaKnown RBP22.71■■□□□ 1.23
SHISA4-201ENST00000362011 P2RX5Q93086 422 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 VTI1AQ96AJ9 217 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 HVCN1Q96D96 273 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 GLT1D1Q96MS3 346 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 MAP7D2Q96T17 732 aa22.71■■□□□ 1.23
SHISA4-201ENST00000362011 SMIM35A0A1B0GVV1 85 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 FSD2A1L4K1 749 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 LRRIQ4A6NIV6 560 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 CYP2C9P11712 490 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 SCP2P22307 547 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 ABCD1P33897 745 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 LAMTOR4Q0VGL1 99 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 TFDP1Q14186 410 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 ZC2HC1CQ53FD0 456 aaPredicted RBP22.7■■□□□ 1.22
SHISA4-201ENST00000362011 DHX40Q8IX18 779 aaKnown RBP22.7■■□□□ 1.22
SHISA4-201ENST00000362011 NELFCDQ8IXH7 590 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 STRA6Q9BX79 667 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 PHF24Q9UPV7 400 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 AKT3Q9Y243 479 aa22.7■■□□□ 1.22
SHISA4-201ENST00000362011 GOLGA6L19H0YKK7 550 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 GTF2BQ00403 316 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 PTPN11Q06124 597 aaPredicted RBP22.69■■□□□ 1.22
SHISA4-201ENST00000362011 ITGA7Q13683 1181 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 HIC1Q14526 733 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 CENPPQ6IPU0 288 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 RHPN2Q8IUC4 686 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 TMEM161BQ8NDZ6 487 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 TSG101Q99816 390 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 COL25A1Q9BXS0 654 aaPredicted RBP22.69■■□□□ 1.22
SHISA4-201ENST00000362011 PRKAG2Q9UGJ0 569 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 ADGRA3Q8IWK6 1321 aa22.69■■□□□ 1.22
SHISA4-201ENST00000362011 A0A1W2PQ45 241 aaPredicted RBP22.68■■□□□ 1.22
SHISA4-201ENST00000362011 A0A1W2PQY0 241 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 TRIM49BA6NDI0 452 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 TREHO43280 583 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 TPM4P67936 248 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 SHHQ15465 462 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 TPD52L1Q16890 204 aaPredicted RBP22.68■■□□□ 1.22
SHISA4-201ENST00000362011 KNOP1Q1ED39 458 aaKnown RBP22.68■■□□□ 1.22
SHISA4-201ENST00000362011 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.68■■□□□ 1.22
SHISA4-201ENST00000362011 ACCSQ96QU6 501 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 KIFC3Q9BVG8 833 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 SEMA6BQ9H3T3 888 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 ARHGAP28Q9P2N2 729 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 ATP11BQ9Y2G3 1177 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 GRIN2DO15399 1336 aa22.68■■□□□ 1.22
SHISA4-201ENST00000362011 DENND3A2RUS2 1198 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 ZNF200P98182 395 aaPredicted RBP22.67■■□□□ 1.22
SHISA4-201ENST00000362011 LRRC63Q05C16 580 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 NCAPHQ15003 741 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 SPATA1Q5VX52 437 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 GDF6Q6KF10 455 aaPredicted RBP22.67■■□□□ 1.22
SHISA4-201ENST00000362011 FOXR2Q6PJQ5 311 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 KSR1Q8IVT5 923 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 ZBTB8OSQ8IWT0 167 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 KIAA0319LQ8IZA0 1049 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 KCNN1Q92952 543 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 MED15Q96RN5 788 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 C2orf40Q9H1Z8 148 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 KCTD10Q9H3F6 313 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 TMEM206Q9H813 350 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 STARD7Q9NQZ5 370 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 PHLPP2Q6ZVD8 1323 aa22.67■■□□□ 1.22
SHISA4-201ENST00000362011 ZMYM2Q9UBW7 1377 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 A0A0U1RQG5 324 aaPredicted RBP22.66■■□□□ 1.22
SHISA4-201ENST00000362011 VTNP04004 478 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 SRGAP2CP0DJJ0 459 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 HOXD13P35453 343 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 PMS1P54277 932 aaKnown RBP22.66■■□□□ 1.22
SHISA4-201ENST00000362011 UVSSAQ2YD98 709 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 TRIM60Q495X7 471 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 C9orf50Q5SZB4 431 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 ZNF697Q5TEC3 545 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 ANKRD40Q6AI12 368 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 TTI2Q6NXR4 508 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 PPP4R3CPQ6ZMV5 832 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 RUFY4Q6ZNE9 571 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 RNF149Q8NC42 400 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 NLRP4Q96MN2 994 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 FAM49AQ9H0Q0 323 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms