RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RECQLP46063 649 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 EFNA5P52803 228 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 PSMC1P62191 440 aaKnown RBP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 SATB1Q01826 763 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 DUOXA2Q1HG44 320 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 MMEL1Q495T6 779 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ANKRD13AQ8IZ07 590 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 AGBL3Q8NEM8 1001 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 SEPT1Q8WYJ6 367 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 VCXQ9H320 206 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 TJP3O95049 919 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ZRANB2O95218 330 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 CALB1P05937 261 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ACAP3Q96P50 834 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 KLHL8Q9P2G9 620 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 IL9RQ01113 521 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 SKIV2LQ15477 1246 aaKnown RBP19.87■□□□□ 0.77
CLIP2-202ENST00000361545 CTNND1O60716 968 aaKnown RBP19.87■□□□□ 0.77
CLIP2-202ENST00000361545 NAA25Q14CX7 972 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 LRRC31Q6UY01 552 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 MT-ND3P03897 115 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 SOX5P35711 763 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 PDIA5Q14554 519 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 ZKSCAN8Q15776 578 aaPredicted RBP19.87■□□□□ 0.77
CLIP2-202ENST00000361545 TKFCQ3LXA3 575 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 TMTC4Q5T4D3 741 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 PDIK1LQ8N165 341 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 GINM1Q9NU53 330 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 GH1P01241 217 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 CETPP11597 493 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 SPOPLQ6IQ16 392 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 GPRC5AQ8NFJ5 357 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 BCAS4Q8TDM0 211 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 STRIP2Q9ULQ0 834 aa19.87■□□□□ 0.77
CLIP2-202ENST00000361545 KBTBD13C9JR72 458 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 RARBP10826 455 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 APBA1Q02410 837 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 NME3Q13232 169 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 RNF25Q96BH1 459 aaPredicted RBP19.86■□□□□ 0.77
CLIP2-202ENST00000361545 SMARCAD1Q9H4L7 1026 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 CASP2P42575 452 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
CLIP2-202ENST00000361545 IRAK4Q9NWZ3 460 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 BAIAP2L1Q9UHR4 511 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 MOSPD1Q9UJG1 213 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 DEPDC1BQ8WUY9 529 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 JMJD4Q9H9V9 463 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 FBXO2Q9UK22 296 aaPredicted RBP19.86■□□□□ 0.77
CLIP2-202ENST00000361545 EXOC1LA0A1B0GW35 172 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 DGAT1O75907 488 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 ANTXR2P58335 489 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 TTC25Q96NG3 672 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 CEMIPQ8WUJ3 1361 aa19.86■□□□□ 0.77
CLIP2-202ENST00000361545 ACOT2P49753 483 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 PYROXD1Q8WU10 500 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 MED4Q9NPJ6 270 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 UPP2O95045 317 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 FBXL13Q8NEE6 735 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 SPDYE1Q8NFV5 336 aaPredicted RBP19.85■□□□□ 0.77
CLIP2-202ENST00000361545 WDR72Q3MJ13 1102 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 NUP85Q9BW27 656 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 STAP1Q9ULZ2 295 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 PLA2G4FQ68DD2 849 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 ALKBH8Q96BT7 664 aaKnown RBP19.85■□□□□ 0.77
CLIP2-202ENST00000361545 VGLL3A8MV65 326 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 F5H423 210 aaPredicted RBP19.85■□□□□ 0.77
CLIP2-202ENST00000361545 TEX33O43247 280 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 CACNB2Q08289 660 aaPredicted RBP19.85■□□□□ 0.77
CLIP2-202ENST00000361545 C9orf131Q5VYM1 1079 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 BCAP29Q9UHQ4 241 aa19.85■□□□□ 0.77
CLIP2-202ENST00000361545 STXBP3O00186 592 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 GABPB1Q06547 395 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 FAM117BQ6P1L5 589 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 RBM41Q96IZ5 413 aaKnown RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 SIK2Q9H0K1 926 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 POLRMTO00411 1230 aaKnown RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 FTLP02792 175 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 ZNF564Q8TBZ8 553 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 FMO2Q99518 471 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 ANKRD40Q6AI12 368 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 ZNF560Q96MR9 790 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 INO80Q9ULG1 1556 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 AGLP35573 1532 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 IRX4P78413 519 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 TFDP2Q14188 446 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 FAM102AQ5T9C2 384 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.84■□□□□ 0.77
CLIP2-202ENST00000361545 FBXO28Q9NVF7 368 aa19.84■□□□□ 0.77
CLIP2-202ENST00000361545 ACSL3O95573 720 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 SLC25A27O95847 323 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 SLMAPQ14BN4 828 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 CENPUQ71F23 418 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 EXT2Q93063 718 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 TRIM9Q9C026 710 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 KLC2Q9H0B6 622 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 DONSONQ9NYP3 566 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 HPCAL4Q9UM19 191 aa19.83■□□□□ 0.77
CLIP2-202ENST00000361545 RCN2Q14257 317 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 362.5 ms