RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 APOEP02649 317 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 TMEM191BP0C7N4 346 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 SCNN1DP51172 638 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 HLFQ16534 295 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 ZBED8Q8IZ13 594 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 CCDC195A0A1B0GUA6 201 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 CDKAL1Q5VV42 579 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 JAMLQ86YT9 394 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 AGPAT1Q99943 283 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 TRABDQ9H4I3 376 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 SMYD2Q9NRG4 433 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 TMEM120BA0PK00 339 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 FOXP2O15409 715 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 ABCB5Q2M3G0 1257 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 JADE1Q6IE81 842 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 FAF2Q96CS3 445 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 ERP27Q96DN0 273 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 hCG_2014768A0A024R1R8 64 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 NOP56O00567 594 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 PPP1R12AO14974 1030 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 SLC16A3O15427 465 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 CDK17Q00537 523 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 AP3B2Q13367 1082 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 FSCBQ5H9T9 825 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 COL23A1Q86Y22 540 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 SMG5Q9UPR3 1016 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 ARHGAP10A1A4S6 786 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 MCF2P10911 925 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 PDIA2Q13087 525 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 HP1BP3Q5SSJ5 553 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 PDZD4Q76G19 769 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 CALN1Q9BXU9 219 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 ZWILCHQ9H900 591 aa14.89□□□□□ -0.03
SMC5-201ENST00000361138 DCP1AQ9NPI6 582 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 BSDC1Q9NW68 430 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 TTC7AQ9ULT0 858 aaPredicted RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.89□□□□□ -0.03
SMC5-201ENST00000361138 TTC36A6NLP5 189 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GSTA1P08263 222 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 PIGOQ8TEQ8 1089 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 FAM96AQ9H5X1 160 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 SENP1Q9P0U3 644 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 USP11P51784 963 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 STX1BP61266 288 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 SYDE2Q5VT97 1194 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ANO5Q75V66 913 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 DTX3LQ8TDB6 740 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 CAPN6Q9Y6Q1 641 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 KLRC1P26715 233 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 RFX5P48382 616 aaPredicted RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 ZNF746Q6NUN9 644 aaPredicted RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 ZBTB8OSQ8IWT0 167 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ANKS1AQ92625 1134 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 MRPL46Q9H2W6 279 aaKnown RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 SUCLA2Q9P2R7 463 aaPredicted RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 DDX20Q9UHI6 824 aaKnown RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GSTA2P09210 222 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GHRP10912 638 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ALAS1P13196 640 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GALCP54803 685 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GPS1Q13098 491 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 DAB2IPQ5VWQ8 1189 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GRAMD4Q6IC98 578 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 AENQ8WTP8 325 aaKnown RBP14.88□□□□□ -0.03
SMC5-201ENST00000361138 NPHS2Q9NP85 383 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 NPHP3-ACAD11A0A0J9YXS1 232 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 SORBS3O60504 671 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 CCDC22O60826 627 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 TDP2O95551 362 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 MYBL1P10243 752 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 STMN1P16949 149 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 GCLMP48507 274 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ERP44Q9BS26 406 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 HAUS8Q9BT25 410 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 CCDC68Q9H2F9 335 aa14.88□□□□□ -0.03
SMC5-201ENST00000361138 ITIH2P19823 946 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 MARK3P27448 753 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 NOP14P78316 857 aaKnown RBP14.87□□□□□ -0.03
SMC5-201ENST00000361138 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 RTN2O75298 545 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 G3BP2Q9UN86 482 aaKnown RBP14.87□□□□□ -0.03
SMC5-201ENST00000361138 FAM47DPA6NHR8 397 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 MED7O43513 233 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 FSBPO95073 299 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 UCHL3P15374 230 aa14.87□□□□□ -0.03
SMC5-201ENST00000361138 NBPF20Q3BBV1 942 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms