RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ST5P78524 1137 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TNP2Q05952 138 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TUBB2AQ13885 445 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 LLGL2Q6P1M3 1020 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TMCO3Q6UWJ1 677 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 ZNF713Q8N859 430 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-202ENST00000360642 NUDT8Q8WV74 236 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CLUHP3Q96NS8 147 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TUBB2BQ9BVA1 445 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 MYO1AQ9UBC5 1043 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CDC23Q9UJX2 597 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CAPN11Q9UMQ6 739 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 MAN1A2O60476 641 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CTBSQ01459 385 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 HYAL2Q12891 473 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 STIM1Q13586 685 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TERF2Q15554 542 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 ZNF569Q5MCW4 686 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CNNM4Q6P4Q7 775 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 SRGAP1Q7Z6B7 1085 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 FAM35AQ86V20 835 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TBCKQ8TEA7 893 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 GOLGA1Q92805 767 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CRAMP1Q96RY5 1269 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CHP1Q99653 195 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 UBXN6Q9BZV1 441 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CEP44Q9C0F1 390 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 MTMR4Q9NYA4 1195 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 SEC63Q9UGP8 760 aaKnown RBP8.1□□□□□ -1.11
CLCN3-202ENST00000360642 REXO2Q9Y3B8 237 aaKnown RBP8.1□□□□□ -1.11
CLCN3-202ENST00000360642 SPATA31A6Q5VVP1 1343 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 RASSF10A6NK89 507 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 DCDC2CA8MYV0 355 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 SRGNP10124 158 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 CCNE1P24864 410 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 TECP42680 631 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 STRN3Q13033 797 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 STK4Q13043 487 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 KIAA1211LQ6NV74 962 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 CC2D1AQ6P1N0 951 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-202ENST00000360642 WDR59Q6PJI9 974 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 OR8K1Q8NGG5 319 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 PARD6BQ9BYG5 372 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 HOMER2Q9NSB8 354 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 UTRNP46939 3433 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 KIF4AO95239 1232 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 DNM2P50570 870 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 MPP2Q14168 576 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 MEA1Q16626 185 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 REXO1Q8N1G1 1221 aaKnown RBP8.09□□□□□ -1.11
CLCN3-202ENST00000360642 SLC35F6Q8N357 371 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 P2RX5Q93086 422 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 PMEPA1Q969W9 287 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 EXOC2Q96KP1 924 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 PBX4Q9BYU1 374 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
CLCN3-202ENST00000360642 EPN1Q9Y6I3 576 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-202ENST00000360642 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.12
CLCN3-202ENST00000360642 CTAGE9A4FU28 777 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 KIF20AO95235 890 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 HTR3BO95264 441 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 NDUFA10O95299 355 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 TBC1D8O95759 1140 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 PPP1R2P41236 205 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 PCDH1Q08174 1060 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 DDR1Q08345 913 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 ASPRV1Q53RT3 343 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 TEX35Q5T0J7 233 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 OVOS1Q6IE37 1185 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 CREBRFQ8IUR6 639 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 CSGALNACT2Q8N6G5 542 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 CEP112Q8N8E3 955 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 TUBGCP2Q9BSJ2 902 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 LUC7L2Q9Y383 392 aaKnown RBP8.08□□□□□ -1.12
CLCN3-202ENST00000360642 BICDL2A1A5D9 508 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 FAM187AA6NFU0 413 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 POLRMTO00411 1230 aaKnown RBP8.08□□□□□ -1.12
CLCN3-202ENST00000360642 ST8SIA5O15466 376 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 ADCY3O60266 1144 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 SEC31AO94979 1220 aaKnown RBP8.08□□□□□ -1.12
CLCN3-202ENST00000360642 FCER1AP12319 257 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 AMPD2Q01433 879 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 ZNF460Q14592 562 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 MIIPQ5JXC2 388 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 JAKMIP3Q5VZ66 844 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 SP8Q8IXZ3 490 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 KIAA0895Q8NCT3 520 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 SLF1Q9BQI6 1058 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms