RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 OR8K1Q8NGG5 319 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 TCP11Q8WWU5 503 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 CYP26B1Q9NR63 512 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 CAPN11Q9UMQ6 739 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 MAFBQ9Y5Q3 323 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 IGSF9BQ9UPX0 1349 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 NKRFO15226 690 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAPK13O15264 365 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 TEX33O43247 280 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 PRPF6O94906 941 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 GGPS1O95749 300 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 NR3C1P04150 777 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 KRT13P13646 458 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 UBA1P22314 1058 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 STAT5BP51692 787 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZBED6P86452 979 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCZ1BP86790 482 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCZ1P86791 482 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 RBL2Q08999 1139 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 KCNA10Q16322 511 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 CELF3Q5SZQ8 465 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 TAPT1Q6NXT6 567 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 NTPCRQ9BSD7 190 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 NIFKQ9BYG3 293 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 SMARCAD1Q9H4L7 1026 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 INTS13Q9NVM9 706 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 DDX41Q9UJV9 622 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 CDH23Q9H251 3354 aa11.77□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZNF236Q9UL36 1845 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 RSPH10B2B2RC85 870 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 KBTBD13C9JR72 458 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 RBAK-RBAKDNI3L0D1 243 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 DUSP11O75319 330 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 OFD1O75665 1012 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 GH1P01241 217 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC175P0C221 793 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 RSPH10BP0C881 870 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 MYBP10242 640 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 SMPD1P17405 629 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 CASP14P31944 242 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 KRT9P35527 623 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 GTF2BQ00403 316 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 BEX3Q00994 111 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 SP4Q02446 784 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 LRMPQ12912 555 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 STRN3Q13033 797 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 SYCP1Q15431 976 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 PTPN14Q15678 1187 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 ANO5Q75V66 913 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 CACNA2D4Q7Z3S7 1137 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 HAUS6Q7Z4H7 955 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 TC2NQ8N9U0 490 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 GLG1Q92896 1179 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 TMX1Q9H3N1 280 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 ABHD16BQ9H3Z7 469 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 LUC7LQ9NQ29 371 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 PDLIM7Q9NR12 457 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 ABHD10Q9NUJ1 306 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 WRAP73Q9P2S5 460 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 GNEQ9Y223 722 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 PAXBP1Q9Y5B6 917 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 KIAA1217Q5T5P2 1943 aa11.76□□□□□ -0.53
TRAPPC4-201ENST00000359005 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC169A6NNP5 214 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 SFI1A8K8P3 1242 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 TCF7P36402 384 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 ACLYP53396 1101 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 EPHB4P54760 987 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 KRT83P78385 493 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 ENPEPQ07075 957 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 UTP14CQ5TAP6 766 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 INTS8Q75QN2 995 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms