RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PPP2R5EQ16537 467 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 RNF207Q6ZRF8 634 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 MREGQ8N565 214 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ATG4AQ8WYN0 398 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PRCCQ92733 491 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 SLC35C1Q96A29 364 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 C9orf72Q96LT7 481 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 GLT8D2Q9H1C3 349 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PABPC3Q9H361 631 aaKnown RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ABCF3Q9NUQ8 709 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 TTC7AQ9ULT0 858 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 DISP2A7MBM2 1401 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM120BA0PK00 339 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 GAS8O95995 478 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 MYCLP12524 364 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PDE6CP51160 858 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ORC2Q13416 577 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ARSHQ5FYA8 562 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 SWT1Q5T5J6 900 aaKnown RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 MEX3CQ5U5Q3 659 aaKnown RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 CD302Q8IX05 232 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 LNX1Q8TBB1 728 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 TATDN2Q93075 761 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 HAUS1Q96CS2 278 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF577Q9BSK1 485 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 NUP85Q9BW27 656 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 FAM129AQ9BZQ8 928 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ANAPC5Q9UJX4 755 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TISP43B9A030 160 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 F5H6K3 240 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.283e-6■■■□□ 19.1
CSDE1-203ENST00000358528 CALCAP01258 141 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MYBL1P10243 752 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PAX7P23759 505 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ATP5DP30049 168 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MAPK4P31152 587 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RPL21P46778 160 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 GPC5P78333 572 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 KLRC3Q07444 240 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MAPK7Q13164 816 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 FAM102BQ5T8I3 360 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PALB2Q86YC2 1186 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SAAL1Q96ER3 474 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 AGPAT1Q99943 283 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DDX23Q9BUQ8 820 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 KCTD10Q9H3F6 313 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ETNK1Q9HBU6 452 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DDX4Q9NQI0 724 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CTNNAL1Q9UBT7 734 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ANAPC7Q9UJX3 599 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SYNGAP1Q96PV0 1343 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 IGSF9BQ9UPX0 1349 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 HIP1RO75146 1068 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SERPINB2P05120 415 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 FNTAP49354 379 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MXI1P50539 228 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 KRT17Q04695 432 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DRP2Q13474 957 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 EPHA7Q15375 998 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ABCB5Q2M3G0 1257 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CBWD6Q4V339 395 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CBWD3Q5JTY5 395 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CBWD5Q5RIA9 395 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RBM26Q5T8P6 1007 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 HHATQ5VTY9 493 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CHADLQ6NUI6 762 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PASD1Q8IV76 773 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF564Q8TBZ8 553 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ALG3Q92685 438 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SPDL1Q96EA4 605 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TGS1Q96RS0 853 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 STK33Q9BYT3 514 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 APEX2Q9UBZ4 518 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RBAK-RBAKDNI3L0D1 243 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 GH2P01242 217 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PDHA1P08559 390 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DRD4P21917 467 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RPA1P27694 616 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 CHRNA3P32297 505 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SLMAPQ14BN4 828 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TAF11Q15544 211 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM132AQ24JP5 1023 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ACCSLQ4AC99 568 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ZCWPW2Q504Y3 356 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SYDE2Q5VT97 1194 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MIER3Q7Z3K6 550 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RHOT2Q8IXI1 618 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SYT2Q8N9I0 419 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PWWP2AQ96N64 755 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RUNDC3BQ96NL0 473 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PITPNM3Q9BZ71 974 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 YIPF3Q9GZM5 350 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TMOD2Q9NZR1 351 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 LARSQ9P2J5 1176 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 FAM86B1E9PN63 330 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms