RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GOLGA6DP0CG33 693 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 CARSP49589 748 aaKnown RBP24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 RNASE9P60153 205 aaKnown RBP24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 PSMC5P62195 406 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 PHLDB3Q6NSJ2 640 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 NT5DC3Q86UY8 548 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 MREGQ8N565 214 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 ANKEF1Q9NU02 776 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 GOLGA6AQ9NYA3 693 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 LTBP3Q9NS15 1303 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 ZBTB48P10074 688 aaPredicted RBP24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 KRT76Q01546 638 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 HAUS6Q7Z4H7 955 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 OLIG1Q8TAK6 271 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 IFT81Q8WYA0 676 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 HES6Q96HZ4 224 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 NFU1Q9UMS0 254 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 WDR64B1ANS9 1081 aa24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 RDM1Q8NG50 284 aa24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 SLC35G2Q8TBE7 412 aa24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 HOMER2Q9NSB8 354 aa24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 SCAF8Q9UPN6 1271 aaKnown RBP24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 EMSYQ7Z589 1322 aa24.14■■□□□ 1.45
NKX2-1-201ENST00000354822 ANKRD62A6NC57 917 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 RAD51CO43502 376 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 EGFRP00533 1210 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 EIF2AK2P19525 551 aaKnown RBP24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 MCCD1P59942 119 aaPredicted RBP24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 RNF207Q6ZRF8 634 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 DNAAF5Q86Y56 855 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 TRERF1Q96PN7 1200 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 RMDN3Q96TC7 470 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 PCIF1Q9H4Z3 704 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 HSPBP1Q9NZL4 362 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 EXOC7Q9UPT5 735 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 BCS1LQ9Y276 419 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 ARHGAP44Q17R89 818 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 KLHL7Q8IXQ5 586 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 PDCD2LQ9BRP1 358 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 GOLPH3Q9H4A6 298 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 TTC7AQ9ULT0 858 aaPredicted RBP24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 USP20Q9Y2K6 914 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 CD2APQ9Y5K6 639 aa24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 ASTN2O75129 1339 aaPredicted RBP24.13■■□□□ 1.45
NKX2-1-201ENST00000354822 FOXN3O00409 490 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 MAFGO15525 162 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 MYCLP12524 364 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 VCAM1P19320 739 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 GMPSP49915 693 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 NCKAP1LP55160 1127 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 CUL1Q13616 776 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 TSEN2Q8NCE0 465 aaKnown RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 CASKIN2Q8WXE0 1202 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 AGPAT1Q99943 283 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 ISCUQ9H1K1 167 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 UBE2TQ9NPD8 197 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 PXMP2Q9NR77 195 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 PPATQ06203 517 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 ARHGEF16Q5VV41 709 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 MICALL2Q8IY33 904 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 HVCN1Q96D96 273 aa24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 TAF1DQ9H5J8 278 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 NOC2LQ9Y3T9 749 aaKnown RBP24.12■■□□□ 1.45
NKX2-1-201ENST00000354822 SMTNP53814 917 aa24.11■■□□□ 1.45
NKX2-1-201ENST00000354822 CLUL1Q15846 466 aa24.11■■□□□ 1.45
NKX2-1-201ENST00000354822 EPC2Q52LR7 807 aa24.11■■□□□ 1.45
NKX2-1-201ENST00000354822 CBWD1Q9BRT8 395 aa24.11■■□□□ 1.45
NKX2-1-201ENST00000354822 RPAP3Q9H6T3 665 aaPredicted RBP24.11■■□□□ 1.45
NKX2-1-201ENST00000354822 KRIT1O00522 736 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 DLG4P78352 724 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 PPP3CAQ08209 521 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 CFAP58Q5T655 872 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 RHOT2Q8IXI1 618 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 IQCKQ8N0W5 287 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 SLITRK6Q9H5Y7 841 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 A6NNZ2 444 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 BACH1O14867 736 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 BUB1BO60566 1050 aaPredicted RBP24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 HADHBP55084 474 aaKnown RBP24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 PEX3P56589 373 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 SPP2Q13103 211 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 MTMR2Q13614 643 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 TUBB8Q3ZCM7 444 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 XKR9Q5GH70 373 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 MAATS1Q7Z4T9 603 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 CCDC26Q8TAB7 109 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 SENP7Q9BQF6 1050 aa24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 CNOT7Q9UIV1 285 aaKnown RBP24.1■■□□□ 1.45
NKX2-1-201ENST00000354822 ESYT3A0FGR9 886 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 SART1O43290 800 aaKnown RBP24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 TCEAL1Q15170 157 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 PPP2R5EQ16537 467 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 ZNF746Q6NUN9 644 aaPredicted RBP24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 SAMD7Q7Z3H4 446 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 OSGEPQ9NPF4 335 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 GJA3Q9Y6H8 435 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 ZSCAN5CA6NGD5 496 aaPredicted RBP24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 FZD9O00144 591 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 VWA5AO00534 786 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 DKC1O60832 514 aaKnown RBP eCLIP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms